|
Name : Snov_1404 (Snov_1404) Accession : YP_003693333.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 1471266 - 1472705 bp Length : 1440 bp Strand : - Note : KEGG: xau:Xaut_4676 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein DNA sequence : ATGCCTGCATCGCCCGCCCTCGTCTGGTTCCGCGACGATCTCCGCCTCGCCGACAATCCCGCGCTCCATGCCGCACAGCG GAGCGGCCGGCCGCTCGTGCTACTCTACCTGCTGGACGAGGAGAGCGAAGGCATACGCCCGCTCGGCGGCGCCGCACGCT GGTGGCTCGGCCGGGCGCTGGCGTCCGTGACGGAGGCGATTGAGGCCAAGGGCGGCCAACTGATCCTGAGGCGCGGCAAG GCGGGCGAGGTTGTCCCCGCCGTGGCGGCGGAGGCCAAAGCCGGCGCCATCTACTGGAACCGCCGCTACGGCGCGGCCGA GATCGCCGTCGACGCCGCGCTCAAGACGGAGCTCGCACAAAAGGGCCTGATGGTCGAGAGCTTCAACGGATCGCTGCTGC ATGAGCCATGGACGGTGAAGACGCAGTCTGGCGGTCCGTTCAAGGTGTTTGGACCGTTCTATCGCAACGCCGCCCAGCAC GACATCCGCCGCCCTGCCAGGGTGGGCAGCCACTGGCATTTCGCCGAGACGCCGGCGGGCGATGAGTTGCGCGACTGGAA GCTGGAGCCGACCACGCCCGATTGGGCCGGCGGGCTCCGCGAGAGCTGGATTCCCGGCGAGGATGGCGGCCGCGCCGCGC TCGCCGCCTTCGTCGACGGCGGCCTTCGCAGCTATGCCGCGGGTCGCGACCGGCCGGACATGGAGCACACCTCGCGCCTG TCCCCATATCTGCGCTTCGGCCATCTCTCGCCACAACAGGTGCTCGCCGCCGTGCGCCACGCCGCAGATGCCGGCGAGGT GCGGGGTACGGATGTCGAGAAATTCGTCAGCGAGCTCTACTGGCGCGAATTCTCTTACCATCTGCTGTTCCATTTCCCGG ACCTCGCGCAGGTCAATTTCAACCGCCGCTTCGACGGCTTCGAATGGAACCAGGATGCCAAGATCGAGCGCGCCTGGCAG CGCGGACTCACCGGCTATCCGCTCATCGACGCCGGCATGCGCCAGCTCTGGCAGACCGGCTGGATGCATAACCGCGTGCG CATGGTGGCCGCCTCCTTCCTCATCAAGCACGCGCTCGTCGACTGGCGGCGCGGCGAGGTCTGGTTCTGGGACACGCTGG TCGATGCCGATCCGGCCAACAATGCCGCCAGCTGGCAATGGGTCGCCGGCTCGGGGGCGGATGCCGCGCCCTATTTCCGC ATCTTCAATCCGGTCACCCAGGGCGAGAAATTCGATCCCGATGGCGCCTATGTCCGGCGTTTCGTGCCGGAGCTGGCGGG CCTTCCCGACACGTCGATCCACAAGCCGTGGCAAGCCCCGCCGCAGGTGCTGGCACAGGCCGGCGTGAGGCTGGGCGAGA CCTATCCGCACCCGATCGTCGACCATGCCGCGGCGCGCCGGCGTGCGCTGGAACGCTATCAGCGCATTCGCGGGGATTGA Protein sequence : MPASPALVWFRDDLRLADNPALHAAQRSGRPLVLLYLLDEESEGIRPLGGAARWWLGRALASVTEAIEAKGGQLILRRGK AGEVVPAVAAEAKAGAIYWNRRYGAAEIAVDAALKTELAQKGLMVESFNGSLLHEPWTVKTQSGGPFKVFGPFYRNAAQH DIRRPARVGSHWHFAETPAGDELRDWKLEPTTPDWAGGLRESWIPGEDGGRAALAAFVDGGLRSYAAGRDRPDMEHTSRL SPYLRFGHLSPQQVLAAVRHAADAGEVRGTDVEKFVSELYWREFSYHLLFHFPDLAQVNFNRRFDGFEWNQDAKIERAWQ RGLTGYPLIDAGMRQLWQTGWMHNRVRMVAASFLIKHALVDWRRGEVWFWDTLVDADPANNAASWQWVAGSGADAAPYFR IFNPVTQGEKFDPDGAYVRRFVPELAGLPDTSIHKPWQAPPQVLAQAGVRLGETYPHPIVDHAAARRRALERYQRIRGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 6e-66 | 44 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-65 | 43 |
