Gene Information

Name : Snov_1242 (Snov_1242)
Accession : YP_003693176.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1285869 - 1286531 bp
Length : 663 bp
Strand : +
Note : KEGG: xau:Xaut_1075 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGCATACTTCTGGTCGAGGACGACGCCGTTCTGGCGGATGGGATCCGTGCGGGACTCTGGCTGGCCGGGCTCACCGT
CGACGCGGTGGGCAACTGCGCCGATGCCGAGGCCGCGCTGGGTTCGTCGCGCTTTGATGCCGTCGTGCTCGATCTGATGC
TGCCGGACGGCTCGGGGTTCGATGTCCTGGCGACGCTGCGCGCGCGGCACGACGCGACCCCGGTCATCGTGCTGACGGCG
CTTGACGAGACGCCGGACCGGGTGCGTGGGCTGGACGGCGGTGCGGACGACTTTCTCGGCAAGCCGTTCGATCTCGACGA
GCTCGCCGCGCGCCTGCGGGCGTTGGTCCGGCGAGGCGGCGGTCGGGCGAGCCCGCTTCTCACCCATGGCACTGTCGCGC
TCGATCCCGCGACGCTCTCGGTGAGCATCGACGAAGTTCCCGTGCCGGTGTCTCGGCGGGAGTTCGCCGTACTGTCGATG
CTGATGGAGCGGCCCGGTGTGATCCGCTCGAAAGGCGAACTGGAGGAGCGGCTCTATGGCTGGCAGGAGGAGATCGAGAG
CAACACGGTCGAGGTCTACATCCATAACCTGCGTGCCAAGCTCGGCCGCGATCTGATCGAGACGGTGCGTGGGCTCGGCT
ATCGGCTGCGGGTACCGGCATGA

Protein sequence : 
MRILLVEDDAVLADGIRAGLWLAGLTVDAVGNCADAEAALGSSRFDAVVLDLMLPDGSGFDVLATLRARHDATPVIVLTA
LDETPDRVRGLDGGADDFLGKPFDLDELAARLRALVRRGGGRASPLLTHGTVALDPATLSVSIDEVPVPVSRREFAVLSM
LMERPGVIRSKGELEERLYGWQEEIESNTVEVYIHNLRAKLGRDLIETVRGLGYRLRVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-31 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_1242 YP_003693176.1 two component transcriptional regulator BAC0487 Protein 5e-30 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_1242 YP_003693176.1 two component transcriptional regulator VFG0473 Protein 6e-30 42