Gene Information

Name : Snov_1234 (Snov_1234)
Accession : YP_003693168.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279948 - 1280250 bp
Length : 303 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: xau:Xaut_1093 transposase IS3/IS911 family protein

DNA sequence :
ATGCGAGCCTCACGGTTCACAGAGGAACAGATCATCGGGATGCTGAAGGAGCAGGAGGCGGGCGCGAAGACCGCTGACGT
CTGCCGCAGGCACGGCATCTCCTCGGCGACCTTCTACAAGTTCAAGGCCAAGTACGGCGGCATGGACGTGTCCGATGCCC
GGCGGCTGAAGGCGCTCGAGGAGGAGAACGCGCGGCTGAAGAAGCTGCTGGCGGAGCAGATGCTGGATAACGCCATCAAG
CGCTCATCTGGCGGTCGGTTCCGCGGCCAGTCCAGCAGGCGCGCCTGGCAGCCTTGCCGATAG

Protein sequence :
MRASRFTEEQIIGMLKEQEAGAKTADVCRRHGISSATFYKFKAKYGGMDVSDARRLKALEEENARLKKLLAEQMLDNAIK
RSSGGRFRGQSSRRAWQPCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 5e-18 64
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 5e-18 64
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 1e-17 63
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-18 63
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 8e-16 53
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-13 51
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-13 51