Gene Information

Name : DaAHT2_0063 (DaAHT2_0063)
Accession : YP_003689395.1
Strain : Desulfurivibrio alkaliphilus AHT2
Genome accession: NC_014216
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 76400 - 79024 bp
Length : 2625 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dal:Dalk_3434 ATP-dependent chaperone ClpB; SMART: AAA ATPase

DNA sequence :
ATGAAATTTGATAAATTTACCATGAAATCCCAGGAGGCGGTGCAGGAGGCCCAGAGCCTGGCCCTGGAGCGCCAGCACCA
GGAGCTGCAGCCGGAACATCTGGCCAAGGTGCTGCTGGATCAAACCGACGGGGTGATCGCCCCGGTGCTGCAGAAGATGG
GGGTCAGCCGGGAAAAACTGGCCGCCGAAATGGAGGCACTGGTCAGTAAGCTGCCCCAGGTGAGCGGGGCCGGCGCCACC
CAGCTCTATGCTTCCACCGCTTTTCAGCGCCTGCTGGACCGGGCCTTCAAGGTGGCCTCCGGCATGCAGGACGAATATGT
CAGCCAGGAGCATCTGGTCCTGGCTCTGCTGGAAGACAAGGATGCCGCGGCCGCCCGGGTTTTGACCGCTCAGGGGGTCA
CCAAAGATGCCTTCCTGAAGGCCCTGGAAAGCGTGCGGGGCAGCCAGCGGGTCACCGACCCCAACCCCGAAGACAAATAC
CAGGCCCTGGAAAAATATGCCCGCAACCTCACCGACGTGGCCCGCCAGGGCAAGCTCGACCCGGTGATCGGTCGTGATGA
CGAGGTGCGCCGGGTGGTGCAGGTGCTTTCCCGGCGGACCAAGAACAATCCGGTGCTGATCGGTGAGCCGGGGGTGGGCA
AGACCGCCATCGTCGAGGGCCTGGCTCAACGCATTGTCAATGGCGACGTGCCGGACACCCTGCGTAACAAGCAGGTGATT
GCACTGGATATGGGGGCGCTGGTGGCCGGTGCCAAGTACCGGGGCGAGTTCGAGGATCGCTTAAAGGCGGTACTCAAGGA
GATCCAGCAGCGCCAAGGCGAGGTGGTCCTGTTCATCGACGAGATCCACACTCTGGTGGGGGCCGGGGCCGCCGAAGGCT
CCATGGATGCCTCCAACATGCTTAAACCCGCCCTGGCCCGGGGCGAGTTGCACTGCGTGGGCGCCACCACCTTGAACGAG
TACCGCAAGTATATCGAAAAAGACGCCGCTCTCGAACGCCGCTTCCAGCAGGTGCTGGTCAAGGAGCCCAGCGTCGAGGA
TACCATCGCCATCCTGCGGGGGATCAAGGAGAAGTACGAGGTGCACCACGGGGTGCGGATCAAGGACTCGGCCACGGTGG
CCGCCGCCACCCTTTCCAACCGCTACATCACCGATCGCTTCCTGCCGGACAAGGCCATCGACCTGGTGGATGAAGCGGCC
TCCCGGCTGCGCATCGAGATTGACTCCATGCCCACTGAGATCGACGAGGTCGAGCGCAAAAAGATCATGCTGGAGATCGA
GCGCGAGGCCTTGAAGAAGGAGAGCGACAAGTCTTCCCAGGAACGGCTGAGCAAGGTGGAGGCCGAACTGGCCGACTGCA
ACGAGGCCCTGCAGGCCATGAAGGGCCACTGGAGCCTGGAAAAAGAGATCATCCAAGAGATCCGCGATATCAAGGCCAAG
ATTGACGAGGCCCGCATTGAAGAACAGCAGGCCGAACGGCAGGGTGATTTGAGCCGGGTGGCGGAGATCCGCTATGGCCG
CATCGTGGAGCTGGAAAAGCAGTTGGCCGCTAAAAATGAGCGGCTGGCGGAAATCCAGCAGGATCGCAAGATGCTGAAAG
AAGAGGTGGACGAGGAAGATGTGGCCGCGGTGGTGGCCAAGTGGACCGGCATTCCCACCGACCGGCTGCTGGAAGGGGAA
AAGGAAAAGCTGGTCAACGCCGATGCCAAGCTCAGCGAACGGGTGGTGGGCCAGCAGGAGGCCATCGCCGCGGTGGCCAA
CGCCGTGCGTCGGGCCCGGGCGGGCCTGCAGGACCCCAACCGGCCCCTGGGCTCCTTCATCTTTCTGGGCCCCACCGGGG
TGGGCAAGACCGAGTTGGCCCGCTCCCTGGCCGCCTTCCTGTTCGACACCGAAAAGGCCATGATCCGGCTGGATATGTCC
GAGTTCATGGAGAAACACTCGGTGGCCCGGCTGATCGGCGCACCGCCGGGTTACGTGGGTTACGAAGAGGGAGGCTACCT
CACCGAGGCGGTGCGCCGCCGGCCCTATTCGGTGATCCTCTTTGATGAAATCGAAAAGGCCCACCCCGATGTCTTCAACG
TTCTGCTGCAGATCCTCGATGACGGTCGGATGACCGACGGCCAGGGAAGGACGGTGGATTTCAAGAACACCATTCTGATC
ATGACCTCCAACCTGGGCAGCCAGTTGATCATGGACCTGGGCGAGGAGCGCCGGCAAGAGATGAAGGCGCGGATTGATGA
GATCCTGCATGCCCAGTTCAAGCCGGAATTCTTGAATCGGGTGGATGAAATCATCATCTTCCATGCCTTGAACCGTGAGC
ACTTGAGCCGGATTGTCGATATCCAGTTGCAGCTACTCACCCAGCGGTTGCTGGAGCAGCACTTCAAGATTGAACTGACC
CCGGCGGCCCGGGAGTTCGTCATTGAGGTGGGCTATGACCCCAACTACGGGGCGCGGCCGTTGAAACGGGCGATTCAGCG
TCACATCCAGGATGCGCTGGCCATGAAGATCCTGGAAGGGGCCTTTGTCGAAGGGGATACCATCCGCATCGACCGGCCTG
AGGGCAGCGATGCCCTGAGCTTCAGCCGGGTTGCCGGCGACGAGGCTGGGCTGGACTCCGCCTGA

Protein sequence :
MKFDKFTMKSQEAVQEAQSLALERQHQELQPEHLAKVLLDQTDGVIAPVLQKMGVSREKLAAEMEALVSKLPQVSGAGAT
QLYASTAFQRLLDRAFKVASGMQDEYVSQEHLVLALLEDKDAAAARVLTAQGVTKDAFLKALESVRGSQRVTDPNPEDKY
QALEKYARNLTDVARQGKLDPVIGRDDEVRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPDTLRNKQVI
ALDMGALVAGAKYRGEFEDRLKAVLKEIQQRQGEVVLFIDEIHTLVGAGAAEGSMDASNMLKPALARGELHCVGATTLNE
YRKYIEKDAALERRFQQVLVKEPSVEDTIAILRGIKEKYEVHHGVRIKDSATVAAATLSNRYITDRFLPDKAIDLVDEAA
SRLRIEIDSMPTEIDEVERKKIMLEIEREALKKESDKSSQERLSKVEAELADCNEALQAMKGHWSLEKEIIQEIRDIKAK
IDEARIEEQQAERQGDLSRVAEIRYGRIVELEKQLAAKNERLAEIQQDRKMLKEEVDEEDVAAVVAKWTGIPTDRLLEGE
KEKLVNADAKLSERVVGQQEAIAAVANAVRRARAGLQDPNRPLGSFIFLGPTGVGKTELARSLAAFLFDTEKAMIRLDMS
EFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGQGRTVDFKNTILI
MTSNLGSQLIMDLGEERRQEMKARIDEILHAQFKPEFLNRVDEIIIFHALNREHLSRIVDIQLQLLTQRLLEQHFKIELT
PAAREFVIEVGYDPNYGARPLKRAIQRHIQDALAMKILEGAFVEGDTIRIDRPEGSDALSFSRVAGDEAGLDSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-98 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DaAHT2_0063 YP_003689395.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-103 44
DaAHT2_0063 YP_003689395.1 ATP-dependent chaperone ClpB VFG2084 Protein 4e-103 42