|
Name : DaAHT2_2042 (DaAHT2_2042) Accession : YP_003691335.1 Strain : Desulfurivibrio alkaliphilus AHT2 Genome accession: NC_014216 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2366279 - 2367541 bp Length : 1263 bp Strand : + Note : PFAM: integrase family protein; KEGG: pca:Pcar_1823 prophage P4 integrase DNA sequence : ATGACTCTCACCGACGCGCAAGTACGTAATGTTAAGGCAGAAGACAAGACCCGCCGCCTGTTCGATGGCGGTGGTCTGTA CCTGGAAGTTGCCCCCAGTGGGGGCAAGTGGTGGCGGTTCAAGTATCGCTTTCCCGGCCAGGGCAAGATCCAGGAGAAAA GATTATCCCTGGGCACCTACCCGGGGGTGGGGCTGAAAGAGGCCAGGGCGAAGCGCGACGAGATGCGCCGGCAGATCGCC CAAGGGATAGACCCGGCCAACCTGCGCCGATCCACCAGGGGCAGCGGTGCATTGGCCGGCAGCTTCGAGGCAGTGGCCAG GCTTTGGCACCGGAACAACTCCACCGATTGGGCACCTTCGCACAGCACCAGGTTAATCCGCCGCTTGGAGGCACACGTCT TCCCCTACCTGGGCAACAGACCCGTTGGCGACATCACCGCCCCGGATTTGATGAACGTGCTCGAGCGCATCAAGAACAGC GGCCACACCGAAACCGCCAGACGAATACAGACCATTTGCGGCCAGGTGTTCCGTTATGCCGTGCAAAAGGGGTTTGCCGA GTACGACCCATCATCAGCTCTGAAGGGTTGCCTGGGCAAGACCACGGCCAAAAACATGGCGACGATCACCGAGCCGGCGG AGGTTGGCCGACTGCTACAGGCCATAGACGAATATCCCGGCACCCAGGTGGTCCGCTGCGCCTTGCAGTTGGCGCCGCTG TTTTTTGTACGCTCCGGCGAGCTGCGCAACGCCAGGTGGGATGAATTCGACCTGGTGAACCGGGAGTGGAAAATTCCGGT GGAGCGCATGAAGATGCGCCAGGATGAAAAACGAGCCCGCCAGGGCCAGGTAGGGCATATCGTGCCCCTGGCCACCCAGG CGGTAAAAATCCTGGAAGAAGAGCTTCGCCCGCTCACCGGTCGTTGCGCCCTGGTCTTTCCAGGGCTGCGCAGCCGTGAC CGGGCCATAAGCGACGCCACGCTGACCAACGCGCTACGGCGCATGGGTTACACCGGCGACGAAATGACCATTCATGGACT TCGCCACATGGCCAGCACCCTGTTGCACGGCCTGGGCTTTCAATCACTGGTCATCGAACGGCAACTGGCCCACAAAGACC GAAACCGAATCCGTGGGGTCTATAACCAGGCCGATTACCTGGAAGAGCGCCGGCGGATGATGCAGAGCTGGGCTGATTAC CTGGGCCAGCTCAAAGCCGGTAAGGCGGAAAAGGTGGTGCCGATAAACAGGTTGGCAGGGTGA Protein sequence : MTLTDAQVRNVKAEDKTRRLFDGGGLYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLGTYPGVGLKEARAKRDEMRRQIA QGIDPANLRRSTRGSGALAGSFEAVARLWHRNNSTDWAPSHSTRLIRRLEAHVFPYLGNRPVGDITAPDLMNVLERIKNS GHTETARRIQTICGQVFRYAVQKGFAEYDPSSALKGCLGKTTAKNMATITEPAEVGRLLQAIDEYPGTQVVRCALQLAPL FFVRSGELRNARWDEFDLVNREWKIPVERMKMRQDEKRARQGQVGHIVPLATQAVKILEEELRPLTGRCALVFPGLRSRD RAISDATLTNALRRMGYTGDEMTIHGLRHMASTLLHGLGFQSLVIERQLAHKDRNRIRGVYNQADYLEERRRMMQSWADY LGQLKAGKAEKVVPINRLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SF2964 | NP_708738.1 | P4-type integrase | Not tested | SHI-1 | Protein | 6e-71 | 42 |
| S4822 | NP_838459.1 | P4-type integrase | Not tested | SHI-1 | Protein | 6e-71 | 42 |
| int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 3e-70 | 42 |
| int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 3e-70 | 42 |
| intP4 | CAE85151.1 | CP4 integrase protein | Not tested | PAI V 536 | Protein | 1e-70 | 42 |
| ECO111_3718 | YP_003236059.1 | putative integrase | Not tested | LEE | Protein | 4e-69 | 41 |
| ECUMN_3322 | YP_002414004.1 | integrase | Not tested | Not named | Protein | 4e-69 | 41 |
| APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 3e-70 | 41 |
| ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 2e-70 | 41 |
| c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 3e-70 | 41 |
| int | AAK00456.1 | Int | Not tested | SHI-1 | Protein | 2e-64 | 41 |
| int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 6e-70 | 41 |
| int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-70 | 41 |
| c3556 | NP_755431.1 | prophage P4 integrase | Not tested | PAI I CFT073 | Protein | 1e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DaAHT2_2042 | YP_003691335.1 | integrase family protein | VFG0626 | Protein | 3e-71 | 42 |
| DaAHT2_2042 | YP_003691335.1 | integrase family protein | VFG1693 | Protein | 4e-71 | 41 |
