Gene Information

Name : DaAHT2_1635 (DaAHT2_1635)
Accession : YP_003690947.1
Strain : Desulfurivibrio alkaliphilus AHT2
Genome accession: NC_014216
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 1916807 - 1917778 bp
Length : 972 bp
Strand : -
Note : SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: dps:DP0802 polysialic acid capsule expression protein (KpsF); PFAM: sugar isomerase (SIS); CBS domain containing protein

DNA sequence :
ATGAGTGTTGAGCAGGCCAGGGAGGTTTTACGCATTGAAGCCGAGGGGATTCTGGCCCTGATCGACCAGGTGGGGGATGA
GTTTGCCCGGGCCGTGGAGTTGATCATGAATTGCCCCAGCCGGCTGGTGCTGACCGGCATCGGCAAGTCCGGCATCATTG
GCCAGAAGATTGCCGCCACCCTGAACTCCACCGGCACCCCGGCTTTCTTTCTCCACCCGGTGGAGGCCATGCACGGGGAC
TTGGGGGTGGTGGACCCCCGGGATGTGATTCTGGCCATCTCCTACAGCGGTGAAACCGCCGAGCTGAATCAGCTCCTGCC
GACCCTGAAAAAACGGGGGGCGGCCATCATTGCCATGACCGGGCGGCCCGAATCCAGCATGGCCCGGGGGGCCGACGTGG
TTCTCTCGGTGACGGTGCCCCGCGAAGCCTGCCCCCTGGGGCTGGCCCCCACCGCCAGCACCACCGCCTCGCTGGCCATG
GGCGATGCCCTGGCGGTGGTGCTGCTCAATCGCAAAAAATTCGATGCCCGGGCCTTCCGGCGCAATCACCCCGGCGGCAG
CCTGGGCGAACGCCTGAAGGTGCGGGTGGCCGAGGTGATGCTCACCGGCGACGGGATTCCCCGGGTCGACAGTACCGCCT
CTTTGGCCGAAGCGTTAGCCGAACTCAACCGCAAGAATCTGGGCGCGGTGCTGGTTATGGCATCGGCCCATCGGATGGCG
GGCATTCTCACCGACGGCGATGTCCGGCGGATGCTGGCCCGGGGAGAAGGACCCGAAACGCTGACCCTGGCCCAGGTGAT
GACCGCCGACCCCAAAAGCATCAGCGCCGAACTGCTGGCCGCCGACGCGCTGAGCATTATGCAGCGCCACGAAGTCACGG
TGCTGCCGGTCACCGACGATGAGCGGCAGTTGATCGGCATTCTCCACCTGCAGGATCTGCTGGGCAAAGGCGAATTTCGC
TTTCTGGTTTGA

Protein sequence :
MSVEQAREVLRIEAEGILALIDQVGDEFARAVELIMNCPSRLVLTGIGKSGIIGQKIAATLNSTGTPAFFLHPVEAMHGD
LGVVDPRDVILAISYSGETAELNQLLPTLKKRGAAIIAMTGRPESSMARGADVVLSVTVPREACPLGLAPTASTTASLAM
GDALAVVLLNRKKFDARAFRRNHPGGSLGERLKVRVAEVMLTGDGIPRVDSTASLAEALAELNRKNLGAVLVMASAHRMA
GILTDGDVRRMLARGEGPETLTLAQVMTADPKSISAELLAADALSIMQRHEVTVLPVTDDERQLIGILHLQDLLGKGEFR
FLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-44 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-44 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-44 41