Gene Information

Name : DaAHT2_1185 (DaAHT2_1185)
Accession : YP_003690502.1
Strain : Desulfurivibrio alkaliphilus AHT2
Genome accession: NC_014216
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1400762 - 1402078 bp
Length : 1317 bp
Strand : -
Note : SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: dsa:Desal_1150 ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/bet

DNA sequence :
ATGCCCATGGACCTCAGCCCTGTAATCACCGCCGCTCGTGAAACCTCCCTGTTTACCGTGGGGGGGCGGGTCAGTCAGGT
GATCGGCATGGTCATCGAAAGTGAGGGGCCCGGGATTCCGGTGGGCAGTATCTGCGAAATCGATGTTTTTCGCGGGCAAG
CCAAGGTGCCGGCGGAGGTGGTGGGGTTCCGCGAGGGCAAGGTGCTGCTGATGCCGCTGGGCGAAATGCGGGGGGTCGAG
CCCGGCGGGGCCATCCGCCTGGTGGAGGGCGCCGCCCGGGTGCCGGTCTCCCAGGATCTGCTGGGCCGGATCATCGACGG
GCTGGGGCAGCCCATGGATGGCAACGGCCCCTTGCCCGGCGAGTCGTTTTATCCCCTCTATGCCGAACCGTTAAATCCCA
TGACCCGCGAGCGGATCACCGATCCGGTGGACGTGGGGGTGCGGGCCATCAACGGCCTGCTTACCCTGGGCAAAGGGCAA
CGGATTGGGATTATGGCCGGCAGCGGGGTGGGCAAGAGTACCCTGATGGGGATGATCGCCCGCCACACCGCCGCCGATAT
CAGTGTGATCGCCCTGATCGGTGAGCGGGGTCGGGAACTCAAGGATTTCATCGAACGCGACCTGGGGCCCGAGGGCCTGG
CCCGCTCGGTGGTGGTGGTGGCCACTTCGGACCAGCCGCCTCTGGTGCGGATGCGAGGTGCTTATCTGGCCATGGCGGTG
GCCGAATATTTCCGCGACCTGGGCCGGGACGTGGTGCTGATGATGGATTCGGTGACCAGGTACGCCATGAGTGGCCGTGA
AGTGGGCCTGGCCATCGGCGAGCCTCCCACCAGCCGGGGTTATACCCCTTCGGTATTCGGCCAGTTGCCCAAACTGCTGG
AACGGGCCGGCACCTGCCAGGGCAAGGGCAGTATCACCGGTATTTTCACCGTCCTGGTGGAGGGTGATGATATGAACGAG
CCCATTGCCGACGCGGTGCGCTCCATCGTCGACGGCCATATCGTGCTCAGCCGCGACCTGGCCAGCCAGGGCCACTACCC
GGCCATCGAGGTAATGGGCAGTGTCAGCCGCTGCATGAGCGATGTGGTGCCCGAGGAGCAGGTCCGGGCCGCCCACCGCT
TCCTGGAAGTTCTCGCCCTCTATCGTCGCTCTGAAGATCTGATCAATATCGGGGCTTATGCCAAGGGCAGCAATCCTAAA
ATCGACGGTGCCATCGCCATGATTGACAAGCTTAACGGCTATTTGCGACAAGCGGTCAACGACCGGGTAACCTTTTCAGA
CAGCGCCGCGCAACTCCAGGCCCTGTTCAAAAAATAG

Protein sequence :
MPMDLSPVITAARETSLFTVGGRVSQVIGMVIESEGPGIPVGSICEIDVFRGQAKVPAEVVGFREGKVLLMPLGEMRGVE
PGGAIRLVEGAARVPVSQDLLGRIIDGLGQPMDGNGPLPGESFYPLYAEPLNPMTRERITDPVDVGVRAINGLLTLGKGQ
RIGIMAGSGVGKSTLMGMIARHTAADISVIALIGERGRELKDFIERDLGPEGLARSVVVVATSDQPPLVRMRGAYLAMAV
AEYFRDLGRDVVLMMDSVTRYAMSGREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQGKGSITGIFTVLVEGDDMNE
PIADAVRSIVDGHIVLSRDLASQGHYPAIEVMGSVSRCMSDVVPEEQVRAAHRFLEVLALYRRSEDLINIGAYAKGSNPK
IDGAIAMIDKLNGYLRQAVNDRVTFSDSAAQLQALFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-98 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-91 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-91 48
escN AAC38383.1 EscN Virulence LEE Protein 5e-85 48
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-92 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-92 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-92 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-92 48
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-92 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-91 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-91 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-85 47
escN AAC31513.1 L0034 Virulence LEE Protein 4e-85 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-85 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-85 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-85 47
escN AAK26715.1 EscN Virulence LEE Protein 3e-85 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-85 47
escN AAL57542.1 EscN Virulence LEE Protein 3e-85 47
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-80 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-85 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-80 47
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-85 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-85 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-81 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-79 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-79 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-79 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-79 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-79 46
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-84 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 7e-75 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-77 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-71 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-77 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-77 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 7e-76 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-74 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-74 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-80 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-74 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-66 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-69 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-69 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-62 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 6e-62 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-62 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-109 51
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-95 50
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG2499 Protein 4e-100 50
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-104 49
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-103 49
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-97 48
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-98 48
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-85 48
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-85 47
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-79 46
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG0555 Protein 3e-62 41
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG2459 Protein 7e-67 41
DaAHT2_1185 YP_003690502.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-68 41