|
Name : TnpD (PFREUD_24660) Accession : YP_003687529.1 Strain : Propionibacterium freudenreichii CIRM-BIA1 Genome accession: NC_014215 Putative virulence/resistance : Unknown Product : transposase IS3/IS911 Function : - COG functional category : - COG ID : - EC number : - Position : 653288 - 653632 bp Length : 345 bp Strand : - Note : - DNA sequence : ATGCCGAAGGAACTGGCGAATGGGAAGCCGACGACGCGTCGCTACTCGGTCGAGGAGAAGGCCGCCGCGGTGCGGATGGT GAGGACGCTGCGCGCGGAGCTGGGCGTCACGCAGGGGACGGTGCAGCGGGTCGCGACGCAGCTCGGTTACGGGGTCGAGT CCGTGCGGATGTGGGTCAAGCAGGCCGACGTCGACGACGGTGTCGTCCCCGGTGTGAGCTCGGCGGAGGAGCAGCGGGTG AAAGAGCTCGAGCAAGAGAATCGGGAGCTGCGCCGGGCCAACGAGGTGCTGAAACGGGCGGCGTCTTTCTTCGGGGCGGA GCTCGACCGCCACTACCGGAAGTAG Protein sequence : MPKELANGKPTTRRYSVEEKAAAVRMVRTLRAELGVTQGTVQRVATQLGYGVESVRMWVKQADVDDGVVPGVSSAEEQRV KELEQENRELRRANEVLKRAASFFGAELDRHYRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF09023.1 | unknown | Not tested | SHI-O | Protein | 2e-11 | 42 |
| c5168 | NP_757016.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 3e-11 | 42 |
| tnpE | AAD44738.1 | TnpE | Not tested | SHI-2 | Protein | 2e-11 | 42 |
| c5214 | NP_757062.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 3e-11 | 42 |
| unnamed | AAL67399.1 | TnpE-like protein | Not tested | PAI II CFT073 | Protein | 2e-11 | 42 |
| S3184 | NP_838467.1 | IS629 orfA | Not tested | SHI-1 | Protein | 3e-11 | 42 |
| unnamed | ADD91740.1 | hypothetical protein | Not tested | PAI-I AL862 | Protein | 2e-11 | 42 |
| SF2979 | NP_708753.1 | IS629 ORF1 | Not tested | SHI-1 | Protein | 3e-11 | 42 |
| ECO111_3775 | YP_003236110.1 | putative IS629 transposase OrfA | Not tested | LEE | Protein | 2e-11 | 41 |
| Z4335 | NP_289560.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-11 | 41 |
| S4062 | NP_839231.1 | IS629 orfA | Not tested | SHI-2 | Protein | 4e-09 | 41 |
| unnamed | CAD42084.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-10 | 41 |
| SF3706 | NP_709445.1 | IS629 ORF1 | Not tested | SHI-2 | Protein | 2e-10 | 41 |
| ECO111_3720 | YP_003236060.1 | putative IS629 transposase OrfA | Not tested | LEE | Protein | 2e-11 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TnpD | YP_003687529.1 | transposase IS3/IS911 | VFG0643 | Protein | 8e-12 | 42 |
| TnpD | YP_003687529.1 | transposase IS3/IS911 | VFG0606 | Protein | 7e-11 | 41 |
| TnpD | YP_003687529.1 | transposase IS3/IS911 | VFG1603 | Protein | 7e-11 | 41 |
