Gene Information

Name : fepC3 (PFREUD_02560)
Accession : YP_003687225.1
Strain : Propionibacterium freudenreichii CIRM-BIA1
Genome accession: NC_014215
Putative virulence/resistance : Virulence
Product : FepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 310470 - 311360 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
GTGACCATCAAGTCCACCCCCGACTCCCCCACCACGGCCGGCAGCGACGTCCCGCACAATGCCGGTGCAGACGGTGCTGG
TACCCACAGTGCTGGCACCCACGAGGCCGGCACGGCCCTCGTCAGCCGGCTCGGCGCCGAACACGTCAAGCTCGCCTACG
GCGACCGGGTGGTGTCCGACAACCTCACCGTGCACATTCCGCCCGGATCGTTCACCGTGATCATCGGGCCGAATGCCTGC
GGCAAGTCGACGCTGCTGCGCGGACTGTCACGGCTGCTCAAGCCCCGCGGCGGCGAGGTGGTGCTCGACGGCAAGGCCAT
CAGCACCTATCGCACCAAGGAGGTGGCCCGTATCGTCGGGCTGCTGCCGCAGTCGTCGACGGCGCCCGAGGGCATCACCG
TGGCCGACCTGGTGGCGCGGGGACGCTACCCGCACCAGGGCCTGATCCGCCAGTGGAGCCACGACGACGAGATGGCCGTC
AACGACGCCATGGAGGTGACCGGCGTCTCCGACCTGCGCAATGCGCCGGTGGACCAGCTGTCGGGCGGGCAGCGCCAGCG
GGTGTGGACGGCGATGGCGCTGGCCCAGCAGACGCCGATCCTGCTGCTCGACGAGCCGACCACCTACCTGGACATCTCGC
ACCAGTACAGCCTGTTGAACCTGTTCGCGGCCCTCAACCGGCAGGGCACCACGATCGTGGCGGTGCTGCACGACCTCAAC
CAGGCGGCCCGCTATGCCACGCACCTGATCGCGATGAAGCAGGGCCGGATCGTGGCCGAGGGCACCCCGCGCGAGGTAGT
GACCGAGCAGACCATGCGTGAGGTGTTCGATGTGGACGCCTTGGTGATGGACGATCCGATCACCGGCACGCCGATGGTCG
TCCCCCGCTGA

Protein sequence : 
MTIKSTPDSPTTAGSDVPHNAGADGAGTHSAGTHEAGTALVSRLGAEHVKLAYGDRVVSDNLTVHIPPGSFTVIIGPNAC
GKSTLLRGLSRLLKPRGGEVVLDGKAISTYRTKEVARIVGLLPQSSTAPEGITVADLVARGRYPHQGLIRQWSHDDEMAV
NDAMEVTGVSDLRNAPVDQLSGGQRQRVWTAMALAQQTPILLLDEPTTYLDISHQYSLLNLFAALNRQGTTIVAVLHDLN
QAARYATHLIAMKQGRIVAEGTPREVVTEQTMREVFDVDALVMDDPITGTPMVVPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-67 52
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-63 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-63 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-66 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-66 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-66 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-66 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC3 YP_003687225.1 FepC BAC0164 Protein 7e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC3 YP_003687225.1 FepC VFG0925 Protein 5e-76 59
fepC3 YP_003687225.1 FepC VFG1042 Protein 6e-54 47