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Name : lysS (PFREUD_02170) Accession : YP_003687181.1 Strain : Propionibacterium freudenreichii CIRM-BIA1 Genome accession: NC_014215 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 257147 - 258754 bp Length : 1608 bp Strand : + Note : ATP + L-lysine + tRNA(Lys) <=> AMP + Pyrophosphate + L-Lysyl-tRNA DNA sequence : GTGAGTGAGCAGCGTCCCGAAAAGGCCCCCCAGTCCCGCGGAAACCAGTCAGCTGGAAAGCAATCTGGCGGAAACCAGTC CCGCAAGAACGAGCCCCGCAAGAACGGGGCTGCCGACGTCGAGCAGGACCTTCCCGAGCAGATGCGCATCCGCGCCGAGA AGCGCCAGCGCTTCCTCGACGAGGGCAAGCAGGCCTACCCGGTTGACCTGCGTCGCGACCACACGCTGGCCGAGGTGCGC GCCACCTGGGGCCACCTGGCCGCCGGCGAGGAGACCCAGGACGAGGTGACCATCGGCGGGCGGGTGATCTTCATCCGCAA TTCCGGCAAGCTGTGCTTCGCCACGCTCCAGGACGGCTTCACCCCTGACCAGGACGCCGAGCGCCTGCAGATCATGCTGT CGAAGGCCGAGGTGGGCGACGAGTCGCTGGCCGCCTGGAAGGCCGACGTCGACCTGGGCGATTTCGTGTGGGTGCGCGGA CGCGTCATTGCGTCCAAGCGCGGCGAGCTGTCGGTGATGGCCAGCGAATGGAAGCTCGCCAGCAAGGCGCTGCGCCCGCT GCCCACCCTGCACAACGACCTGTCGGAGGAGGCGCGCGTCCGGCAGCGCTACAACGACCTGATCGTGCGTCCGGCGGCGC GCACGATGGTGCGCCAGCGGGCGTTGATCACCCGCAAGATCCGCGAGACGCTCGAGGAGCAGGGCTACCTCGAGGTGGAG ACACCGGTGCTGCAGTCGGTGCACGGCGGCGCGGCGGCGCGTCCGTTCACCACGCACCTGAACGCCTTCGACATCGACAT GTACCTTCGCATCGCCCTGGAGCTGCACCTCAAGCGCGTCATGGTGGGTGGGGCCGACCGCGTCTATGAGATGGGTCGGG TGTTCCGCAACGAGGGCGTCGACTCGTCGCACAGCCCCGAGTTCACGATGCTCGAGGCCTACCAGAGCTGGGGCGACCAG TTCACGATCGCCGAGACGCTCAAGTCGATCATCATGAAGGTGGCCGAGGCGCTCGACATCTTCGAGATCCCCACCGATCA GGGTGTCATCGACCTGAAGGGCGAATGGATCTGGCTGCCGGTCTATGAGGGGCTGTCGGGTGAGGTTGGTGAGGAGATCA CCACCAAGACCCCGGTGGAGCACCTGCGCCACATCGCCGACGCCCACAAGGTGGACTACGACGCGTCGTGGATTGACCAG AAGATGGTGCTGCACCTGTTCGAGGAGCTGGTGGAGAAGGGCCTCACCCAGCCCACCTTCGTGTGTGACTTCCCCGAGAT CGCCCAGCCGCTGGCGCGTCGCCATCGCTCCAAGCCGGGCTGCATCGAGGCCTGGGACCTGATCATCGGCGGCATGGAAC GCGGCACCGGCTTCTCGGAGCTGATCGATCCGGTGATCCAGCGCGAGATCCTCACCCAGCAGTCGCTGGCGGCGGCTGCT GGTGATCCCGAGGCCATGCAGCTCGACGAGGACTTCCTCAACGCCCTGGAGCAGGGCTGCCCGCCCATGGGTGGGCTCGG ACTGGGCGTCGACCGGCTGGTGATGCTGTTCACCGGCGCCGGCATCCGCGAGACCATCCTGTTCCCGTTGCTGCGCCCGT TGAACTGA Protein sequence : MSEQRPEKAPQSRGNQSAGKQSGGNQSRKNEPRKNGAADVEQDLPEQMRIRAEKRQRFLDEGKQAYPVDLRRDHTLAEVR ATWGHLAAGEETQDEVTIGGRVIFIRNSGKLCFATLQDGFTPDQDAERLQIMLSKAEVGDESLAAWKADVDLGDFVWVRG RVIASKRGELSVMASEWKLASKALRPLPTLHNDLSEEARVRQRYNDLIVRPAARTMVRQRALITRKIRETLEEQGYLEVE TPVLQSVHGGAAARPFTTHLNAFDIDMYLRIALELHLKRVMVGGADRVYEMGRVFRNEGVDSSHSPEFTMLEAYQSWGDQ FTIAETLKSIIMKVAEALDIFEIPTDQGVIDLKGEWIWLPVYEGLSGEVGEEITTKTPVEHLRHIADAHKVDYDASWIDQ KMVLHLFEELVEKGLTQPTFVCDFPEIAQPLARRHRSKPGCIEAWDLIIGGMERGTGFSELIDPVIQREILTQQSLAAAA GDPEAMQLDEDFLNALEQGCPPMGGLGLGVDRLVMLFTGAGIRETILFPLLRPLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-118 | 52 |
