|
Name : tkt (PFREUD_22360) Accession : YP_003689150.1 Strain : Propionibacterium freudenreichii CIRM-BIA1 Genome accession: NC_014215 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2409053 - 2411119 bp Length : 2067 bp Strand : - Note : - DNA sequence : ATGAGCGACCTGAAGTGGACTGACGAAGATCGCGAGGCGGTCAACATCGCCCGCACACTGGCCGCGGATGCCGTGGAGGC AGCCGGCAGTGGCCACCCCGGAACGGCGATCTCGCTGGCACCGCTGGCTTATCTGCTGTATCAGAAGGTGATGAACGTCG ACCCCGACGACGAGCACTGGATCGGTCGCGACCGCTTCCTGCTGTCGGCCGGGCATGCCTCGGTGCTGCAGTACTCCCAG CTCTACCTGGGCGGTCTCGGCCTTGAGCTGGAAGACCTCAAGTACCTGCGCCAGGCGGGCTCGCGGACTCCCGGCCACCC CGAGTACGGCCACACGAAGTTCATCGAGGCCACCACCGGCCCGCTGGGCGCCGGCATCTCGATGGCCGTCGGCATGGCCA TGGCCGCCCGTCGCGAGCGCGGCCTGTACGACCCGGACAACACCGGCGCCAGCGTGTTCGACCGCTACGTCTACTCGATC GCCGGCGACGGCTGCATGCAGGAAGGCGTGCAGTCCGAGGCCGCGTCGCTGGCCGGCGTGCAGGAGCTCGGCAACCTCAT CGTCTTCTACGACGACAACCGCATCACCATCGAGGGGAAGACCCGCATCGCCTTCGATGAGGACGTCGAGGCCCGCTACG CCGCCTACAGCTGGGATGTGCAGCACATCGACTGGACCAACGGTGGCGACCACTACGAAGAGAACGTGCAGGCCCTGTTC GACGCCATCGAGGCGGCCAAGAAGGTCACCGACAAGCCGAGCCTGATCCGCCTCACCACGGTGATCGGCTGGCCGCTGCC CCATATGGCCGGCAGTGCCCATGTGCACGGCGCCGCCATCGGCGAGGACGAGATCAACGCCATGAAGAAGGTGATCGGAT TCCCCACCGAGCCCTTCACCTTCAACCAGGACATCGTTGCCGACACCCGCAAGGCCCTGGCCGAGCGCGGCAGGAGCGCC CGGGCCGCCTGGGACGAGCGCTTCGCGGCATGGCAGGGCTCGCATGCGGAGCAGGCCGCACTGCTCGACCGCGTGCTGGC CCGCAAGCTGCCCGACGACCTGCAGGTGCCCAGCTTCGAGGCCGGTGCGGTGAGCACCCGCAAGGCCAGTGGCAAGGTGA TCTCGGCCCTGGCCGAGCAGCTGCCCGAGCTGTGGGGCGGCTCCGCCGACCTCGCCGGCTCGAACAACACCACGATCGAG GGTGCCGAGAGCTTCCTGCCCGCCGACCGCGCCACCGATGAGTGGCCCGGCAACCCCTACGGACGCGTGTTGCACTTCGG CATCCGTGAGCATGCGATGGGTGGTGCCCTCAACGGCATCAACCTGTCGGGCCTCACCCGTGCCTTCGGTGGCACCTTCT TCGTGTTCGCCGACTACATGCGTCCCCCGGTACGCCTGGCGGCCCTCATGGGCGCGCCCTCGGTGTTCGTGTGGACGCAC GACTCGGTCGGCGTCGGCGAGGACGGCCCCACCCACCAGCCGGTGGAGCACCTGGCCAGCTACCGCGCCATTCCGGGCCT GGACATCGTGCGCCCGGCCGATGCCAACGAGACGGCCGCCGCGTGGGTCGAGATCCTGTCGCACCACGATCGTCCGGCCG GCATCGTGCTGACGCGCCAGAATGTGCGCACCGTCGACCGCACCTCGGGTGAGTTCGCCTCCACCGACGGCGTCGCCAAG GGTGCCTATGTGCTGCGCGAGGCCCGCAACGGCAAGCCCGAGGTGATCCTGATCGCCACCGGTTCCGAGGTGGAGCCGGC ACTGGACGCCCAGGACATCCTGGAGACCCAGGGCATTGCCACCCGCGTGGTGTCGATGCCGTGCCAGGAATGGTTCGACG CCCAGCCCGCGGAGTACCGCGAAGAGGTGCTGCCCTCCAGCATCGACGCCCGTGTGAGCGTCGAGGCGGGGCTGTCGCTC GGCTGGTCGAAGTACGTCGGCTTCAAGGGCGCCTCGGTGAGCCTGGAGCACTACGGTGCTTCGGCCAAGGGCTCGCTGCT CATGGAGGAGTTCGGCTTCACCGGCGAGCACGTGGCCGAGGTCGCCAAGGGCGTGCTCGGTAAGTGA Protein sequence : MSDLKWTDEDREAVNIARTLAADAVEAAGSGHPGTAISLAPLAYLLYQKVMNVDPDDEHWIGRDRFLLSAGHASVLQYSQ LYLGGLGLELEDLKYLRQAGSRTPGHPEYGHTKFIEATTGPLGAGISMAVGMAMAARRERGLYDPDNTGASVFDRYVYSI AGDGCMQEGVQSEAASLAGVQELGNLIVFYDDNRITIEGKTRIAFDEDVEARYAAYSWDVQHIDWTNGGDHYEENVQALF DAIEAAKKVTDKPSLIRLTTVIGWPLPHMAGSAHVHGAAIGEDEINAMKKVIGFPTEPFTFNQDIVADTRKALAERGRSA RAAWDERFAAWQGSHAEQAALLDRVLARKLPDDLQVPSFEAGAVSTRKASGKVISALAEQLPELWGGSADLAGSNNTTIE GAESFLPADRATDEWPGNPYGRVLHFGIREHAMGGALNGINLSGLTRAFGGTFFVFADYMRPPVRLAALMGAPSVFVWTH DSVGVGEDGPTHQPVEHLASYRAIPGLDIVRPADANETAAAWVEILSHHDRPAGIVLTRQNVRTVDRTSGEFASTDGVAK GAYVLREARNGKPEVILIATGSEVEPALDAQDILETQGIATRVVSMPCQEWFDAQPAEYREEVLPSSIDARVSVEAGLSL GWSKYVGFKGASVSLEHYGASAKGSLLMEEFGFTGEHVAEVAKGVLGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-107 | 44 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-101 | 41 |
