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Name : serS1 (PFREUD_01350) Accession : YP_003687104.1 Strain : Propionibacterium freudenreichii CIRM-BIA1 Genome accession: NC_014215 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 171962 - 173236 bp Length : 1275 bp Strand : + Note : ATP + L-serine + tRNA(Ser) <=> AMP + Pyrophosphate + L-Seryl-tRNA(Ser) DNA sequence : ATGATCGACCCGAAATTGTTGCGCACCGATCCTGACCGCGTCCGCCGTTCCCAGCGGGCCCGGGGCGAGTCCGTCGAGCT TGTTGACCAGGCCCTGGCGGCAGACGAGGCGCGCCGCTCGTCGATCAGCGCCTTCGAGCAGGCCCGCGCCGAGCAGAAGT CGCTGGGCGCGTTGATCGCCAAGGCCTCCGGCGACGAGCGCAATGCGCTGCTGTCGCGCACCAAGGAGCTGGCCGCGAAG GTGCGCGAGCTGGACGCGTCGGCCCACGAGGCCGATGAGCACTACACCGAGGTGGTCAAGCAGTTCGGCAACATCGTCTT CGAGGACGTGCCGGAGGGCGGCGAGGACGACCTGTTCGTCATCGACACCGAGGGCACGCCGCGCGACTTCGCCGGCGAGG GCATCACGATCCGCGACCACCTCGAGCTCGGCGAGATGCTCGACGCCATCGACATGGAGCGCGGCGCCAAGGTGTCGGGC AGCCGCTTCTACTACCTCAAGGGCCCGGGCGCGATGCTCGAGTTCGCCCTGATCCAGTTCGCGCTGCACAAGGCGCTGGA ATGGGGCCTCACCCCGATGATCCCGCCGGCGCTGGTGAACCCGGCCGCCATGGAGGGCACCGGATTCCTCGGCCAGGCCG CCGACGACGTCTACTACCTCGAACGCGACAACCAATACCTGGTCGGCACCGCCGAGGTGCCGCTGGCCGCCTACCACTCC GACGAGATCCTCGATTCCAAGGAACTGCCGCTGCGCTACGCCGGATTCAGCCCGGCCTATCGTCGCGAGGCCGGCAGCTA CGGCAAGGACACCCGCGGCATCTTCCGGGTGCACTGGTTCGACAAGTTCGAGATGTTCACCTACTGCCGTCCCGAGGACG CGGTGGCCGAGCACGAGCGGCTGCTGGCCCACGAGAAGGAGTTCATCAGCGCACTCGGCATCCCGTTCGAGGTGCTCGAC GTCGCCTCCGGCGACCTGGGGCTGTCGGCCGCGCGCAAGTACGACTGCTACGGCTGGGTGCCCTCGCAGGACAAGTACCG CGAGATCACGTCCACCTCGAACTGCACCGAGTTCCAGGCGCGCCGGCTCAACATCCGCATGCGCGATGGCAAGCAGGTGA CGCCCCTGGCGACGCTCAACGGCACGCTGTGCGCGATGACCCGCATGATCGTGATGATCCTCGAGAACTACCAGCAGGTT GATGGTTCCGTGGTGATCCCCGAGGTGCTACGTCCCTACCTGGGTGGACGCGAGGTCTTCACGCCCAAGGGCTGA Protein sequence : MIDPKLLRTDPDRVRRSQRARGESVELVDQALAADEARRSSISAFEQARAEQKSLGALIAKASGDERNALLSRTKELAAK VRELDASAHEADEHYTEVVKQFGNIVFEDVPEGGEDDLFVIDTEGTPRDFAGEGITIRDHLELGEMLDAIDMERGAKVSG SRFYYLKGPGAMLEFALIQFALHKALEWGLTPMIPPALVNPAAMEGTGFLGQAADDVYYLERDNQYLVGTAEVPLAAYHS DEILDSKELPLRYAGFSPAYRREAGSYGKDTRGIFRVHWFDKFEMFTYCRPEDAVAEHERLLAHEKEFISALGIPFEVLD VASGDLGLSAARKYDCYGWVPSQDKYREITSTSNCTEFQARRLNIRMRDGKQVTPLATLNGTLCAMTRMIVMILENYQQV DGSVVIPEVLRPYLGGREVFTPKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-63 | 42 |
