Gene Information

Name : Mesil_0689 (Mesil_0689)
Accession : YP_003684113.1
Strain : Meiothermus silvanus DSM 9946
Genome accession: NC_014212
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 675255 - 676031 bp
Length : 777 bp
Strand : +
Note : COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: ddr:Deide_3p02730 putative manganese/zinc/iron ABC transporter, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C

DNA sequence : 
ATGATCAAGTCCAGCATCAACGAACAAGCTTCGGCCCTTCCCCGGCGGGCGGCGCCCCTCGAGGTGCGCGACCTCACCGT
GGCCTACCACGAGAAGCCCGTGCTGTGGGACGTGGATCTCTCCATCCCCGAAGGCCAGCTCTGCGCCATCGTCGGGCCCA
ACGGCGCGGGCAAGAGCACCCTGATCAAGGCCGTGCTGGGGCTCATCCCCAAGGCCTCGGGCACCGTGCAGTTCTTTGGG
CAGCCGCTCGAGGCCGCCCGGCGCCGCATCGGCTACGTGCCCCAGCGCTCCTCCGTGGACTGGGACTTCCCCACCAACGC
CCTGGACGTGGTGCTGATGGGGCTCTACGGGCGGCTGGGCTGGTTCCGCCGGCCCGGCAAGGCCGAGCGCGAGGCCGCTA
TGCACGCGCTCGAGCAGGTCGGGCTCACCGCCTTCGCCCACCGCCAGATCGCCCAGCTCTCGGGCGGCCAGCAGCAGCGG
GTCTTCCTGGCCCGCGCCCTGGCCCAGGCCTCCGACCTCTACTTCATGGACGAGCCCTTCGCCGGGGTGGACGCGGTCAC
CGAGGCCGCCATCCTGCAGGTGATGCGCGAGCTGAAGAAGCAGGGCAAGACCGTGGTGGTGGTGCACCATGACCTCGAGA
CGGTGCGCGACTACTTCGACCACCTCACCCTGCTCAACGTGCAGGTCATCGCCAGCGGGCCGCTCGAGCAGACCTTCACG
CCCGAGAACCTCAAGGCCACCTACGGCGAGCGCATGAGCGTGGGCGTAGGGAGGTGA

Protein sequence : 
MIKSSINEQASALPRRAAPLEVRDLTVAYHEKPVLWDVDLSIPEGQLCAIVGPNGAGKSTLIKAVLGLIPKASGTVQFFG
QPLEAARRRIGYVPQRSSVDWDFPTNALDVVLMGLYGRLGWFRRPGKAEREAAMHALEQVGLTAFAHRQIAQLSGGQQQR
VFLARALAQASDLYFMDEPFAGVDAVTEAAILQVMRELKKQGKTVVVVHHDLETVRDYFDHLTLLNVQVIASGPLEQTFT
PENLKATYGERMSVGVGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 6e-51 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 8e-51 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-48 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-48 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-48 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-48 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-48 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesil_0689 YP_003684113.1 ABC transporter-like protein BAC0400 Protein 1e-73 63
Mesil_0689 YP_003684113.1 ABC transporter-like protein BAC0440 Protein 3e-50 45
Mesil_0689 YP_003684113.1 ABC transporter-like protein BAC0350 Protein 1e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesil_0689 YP_003684113.1 ABC transporter-like protein VFG0526 Protein 1e-48 43