Gene Information

Name : Ndas_0849 (Ndas_0849)
Accession : YP_003678799.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1041556 - 1042371 bp
Length : 816 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: sro:Sros_0270 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C4E2R3 ABC-type antimicrobial peptide tran

DNA sequence : 
GTGAGCGGCGCGAACGGGGCGGCCTCCGCCCCGGCCTCCACCGCACCGGGTTCCGCCGGTCCGGACGCCGACGGCGAGGC
CGTCCGGCTCACCGACGTCCACCGCGTCTACGCCGACGGGGAGGGCGCCGTCTCGGCCCTGGCCGGGGTGTCGCTGCGGG
TTCCCCGCGGCTCGTTCCTCGCCGTCATGGGGCCGTCCGGGTCGGGCAAGAGCACCCTGCTCAACTGCGCGTCCGGCATG
GACCGCCCCACCTCGGGCTCGGTGGTGGTGGGCGGCACCGACATCAGCTCCCTGCGCGAGCCCCGCCGCACCGAGTTCCG
CCGCGAGCGGGTCGGCTTCGTGTTCCAGTCCTACAACCTGGTGCCCACGCTCACCGCGGAGGAGAACATCACCCTGCCGC
TGCGCCTGGCCGGACGGACCCCCGACCAGGGCTGGCTGCGCGCGCTCGTCGGCCGGGTGGGGGTGGGGCAGCGGCTGCGC
CACCGGCCCACGGAGCTCTCCGGCGGCCAGCAGCAGCGGATCGCGATCGTGCGGGCCCTGGCCTCCCGCCCCGACATCGT
CTTCGCCGACGAACCCACCGGAGCGCTCGACGGCGCGACCGCCGACAGCGTCCTGGGGCTGCTGCGGGAGGTCGTGGACG
AACTCGGCCAGACCGTCGTCATGGTGACCCACGACCCCAAGGCCGCCGCCCGGGCGCACGCCACCGCGGTCATGGCCGAC
GGCCGCCTCGCCGACGTCCTGCACGCCCCCTCCGCGGCCGACCTGGCCGGACGCCTGGCCTCGCTGGAGACGGCCGGGGC
GGAGGCGGACCGATGA

Protein sequence : 
MSGANGAASAPASTAPGSAGPDADGEAVRLTDVHRVYADGEGAVSALAGVSLRVPRGSFLAVMGPSGSGKSTLLNCASGM
DRPTSGSVVVGGTDISSLREPRRTEFRRERVGFVFQSYNLVPTLTAEENITLPLRLAGRTPDQGWLRALVGRVGVGQRLR
HRPTELSGGQQQRIAIVRALASRPDIVFADEPTGALDGATADSVLGLLREVVDELGQTVVMVTHDPKAAARAHATAVMAD
GRLADVLHAPSAADLAGRLASLETAGAEADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_0849 YP_003678799.1 ABC transporter NC_008702.1.4606598. Protein 3e-34 50
Ndas_0849 YP_003678799.1 ABC transporter CP001581.1.gene598.p Protein 8e-42 47
Ndas_0849 YP_003678799.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 45
Ndas_0849 YP_003678799.1 ABC transporter NC_012469.1.7686878. Protein 4e-36 42