Gene Information

Name : Ndas_4787 (Ndas_4787)
Accession : YP_003682677.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5673867 - 5674649 bp
Length : 783 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_0307 hypothetical protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YP71 ABC-type antimicrobial peptide transpo

DNA sequence : 
ATGAACGCGGCCGAGTTCACCGGGGTGAGCCGCCACTACCCCGGCGGTGTACGGGCCCTGGACGGGGTGGACCTGGTCGT
GGGCCGCGGCGAGATGCTGGCGATCGTGGGCCCCTCGGGCTCGGGCAAGTCCACCCTGCTCAACCTGCTCGGCACCCTGG
ACGCGCCGACCTCGGGCACGGTGCGCGTGTTCGGGCACGATGTGGGGTCCCTGCGCGACGACGAGCTGTCCGCGCTGCGG
GCACGCTCGGTCGGTTTCGTCTTCCAGCAGTTCCACCTGGCGCCCAACGTGCGGGCCGTGGACAACGTGGCCGAGGGCCT
GCTGTACTCCGGCGCGTCCAGACGCGAGCGCGGGCGCCGTGCGCTGCGGGCGCTGGAGCGCGTCGGGCTGACCGACCGCG
CCGGCCACCGGCCGCACGAGCTGTCCGGCGGGCAGAGGCAGCGCGTGGCGATCGCCCGCGCTGTGGCCTCCTCCCCCCGG
ATGCTGCTGGCCGACGAGCCGACCGGGGCTCTGGACTCGGCCTCGGGCGCGGCCGTGATGGAACTGCTCGGCGAGCTGCA
CCGGGACGGGGTGACCGTGGTCGTGATCACGCACGACAGGGAGTTGGCCGCGGGTCTGCCGAGACGGGTGGAGGTGCACG
ACGGCCGGATCGTCGCCGACTCCGGTCGCCCGGTCCCGGTGGACACGGGTGCCGACGGCGCGGCGGGGACGGACGGCTCC
GCGCGGCCCCGCGACGCGGCGCGGACGGGCTCCGCAGGACCCCGGGCCAAGGGGGTCCGGTGA

Protein sequence : 
MNAAEFTGVSRHYPGGVRALDGVDLVVGRGEMLAIVGPSGSGKSTLLNLLGTLDAPTSGTVRVFGHDVGSLRDDELSALR
ARSVGFVFQQFHLAPNVRAVDNVAEGLLYSGASRRERGRRALRALERVGLTDRAGHRPHELSGGQRQRVAIARAVASSPR
MLLADEPTGALDSASGAAVMELLGELHRDGVTVVVITHDRELAAGLPRRVEVHDGRIVADSGRPVPVDTGADGAAGTDGS
ARPRDAARTGSAGPRAKGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-27 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-09 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-17 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-18 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-18 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-18 41
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 2e-12 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_4787 YP_003682677.1 ABC transporter NC_008702.1.4606598. Protein 5e-28 49
Ndas_4787 YP_003682677.1 ABC transporter NC_012469.1.7686878. Protein 9e-34 46
Ndas_4787 YP_003682677.1 ABC transporter CP001581.1.gene798.p Protein 7e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_4787 YP_003682677.1 ABC transporter VFG2059 Protein 2e-06 44