Gene Information

Name : Ndas_4277 (Ndas_4277)
Accession : YP_003682172.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5091016 - 5091804 bp
Length : 789 bp
Strand : +
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: ami:Amir_4783 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YGY4 ABC-type cobalamin/Fe3+-sideroph

DNA sequence : 
ATGGACCTGCGCCTGGACGGGCTGTCCGTCGAGCTCGGCGGCGCCCGGATCGTGGAGAGCCTCTCCCTGGACGTGCCCGC
GGGACAGGTCGTGGGGCTGGTGGGCCCCAACGGCTCGGGCAAGTCCACGGCCCTGCGCTGCGTCTACCGGGCGCTGCGCC
CCAGCGGCGGGACCGTGTGGGTCGGGGACGAGGACCTGTCCTCCCTGAGCCTGCGCCGGAGCGCCCAGCGGGTGGCCGCC
CTGACCCAGGAGAGCGGCAGCGACCTCGACTTCACGGTGCAGGAGGTCGTCGCCCTGGGGCGCGCCCCGCACCTGCGCGG
CAACCAGCCGCTCGACGCGCGCGAGCGCGACCTGTGCCGCCGGGCCATGGAGCGCCTGGAGGTGGCCCACCTGGCCCACA
GGGGCGTCATGGAGCTGTCCGGGGGCGAGCGCCAGCGGGTGCTGGTGGCCCGCGCCCTGGTCCAGGAGCCCAGCGTGCTG
GTCCTGGACGAGCCCACCAACCACCTGGACATCCGCCACCAGATCGCGCTGCTGTCCCTGCTCCGGGACTCGGGGCTCAC
CGTCCTGGTGGTCCTGCACGACCTCAACCTGGCCGCGGCGGCCTGCGACCGGATCGGTGTGCTCCACGAGGGCCGACTGG
TGGCCGCGGGCGCTCCCGACCAGGTCCTGACCCCCGCCCTGCTCCTGGAGGTCTTCGGCATCGAGGCCTCCGTCGTCCCC
CATCCCCTGACCGGGGACCCCCAGCTGCTGTACCGGCTGCTCCCCGCCGTCGAGAAAGGCCTCCAGTGA

Protein sequence : 
MDLRLDGLSVELGGARIVESLSLDVPAGQVVGLVGPNGSGKSTALRCVYRALRPSGGTVWVGDEDLSSLSLRRSAQRVAA
LTQESGSDLDFTVQEVVALGRAPHLRGNQPLDARERDLCRRAMERLEVAHLAHRGVMELSGGERQRVLVARALVQEPSVL
VLDEPTNHLDIRHQIALLSLLRDSGLTVLVVLHDLNLAAAACDRIGVLHEGRLVAAGAPDQVLTPALLLEVFGIEASVVP
HPLTGDPQLLYRLLPAVEKGLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-39 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-34 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-23 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-23 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_4277 YP_003682172.1 ABC transporter BAC0164 Protein 7e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_4277 YP_003682172.1 ABC transporter VFG1042 Protein 6e-40 44