Gene Information

Name : Ndas_3510 (Ndas_3510)
Accession : YP_003681417.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4216331 - 4217098 bp
Length : 768 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: mlu:Mlut_21930 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YQ2

DNA sequence : 
ATGGACGGGCACGTCCGGGACCGGGCCGGAGCCGACGCCGCACCCCACGCGCTGCGGGCGTCCGGGCTGACCAGGACACA
CAGGAGGGGAGGCGTCCCCGTCCACGCGCTGGCCGGGGTGGACGCGGCCTTCCCCCGGGGAGGGTTCACGGCGGTCATGG
GCCCCTCCGGCTCGGGCAAGAGCACCCTCCTGCACTGCCTGGCGGGGCTGGAACGCCTCGACGCGGGCACGGTGACGGTC
GAGGGCCAGCTGATCACCGGTCTCGCCGAACCGGCCCTGACCCGGCTGCGCGCACGGGCGTTCGGGTTCGTCTTCCAGTC
CTTCAACCTTCTCCCCTCACTGACCGCGGGGGAGAACATCATCATCGGCCAGCGCCTGTCCGGCCTGCCCCGGGACGAGG
CGTGGCACGACCACCTCGTGGACTCGCTCGGCCTGGCCGACCGCCTCGGCCACCGGCCCTTCGAACTCTCCGGGGGCCAG
CAGCAGCGCGTCGCCGTCGCCCGCGCCCTGGTGCACCGGCCGAGCGTGCTCCTGGCCGACGAACCCACCGGCAACCTCGA
CTCCCGCTCCGGGGCCGGTGTCCTGGAGGCGCTGCGCCGGGCCGCCTCCGACCACGGGCAGACCGTCGTCATGGTCACCC
ACGACCCGGTCGCCGCCGCCCGTGCCGACCGCGTGCTCATGCTTCGCGACGGACGCGTCCAAGGGGAACTGGCCGACCCC
ACCGCGGACTCCGTCCCGGCCTGGATCCGACGTCTGGAGGAGCGGTGA

Protein sequence : 
MDGHVRDRAGADAAPHALRASGLTRTHRRGGVPVHALAGVDAAFPRGGFTAVMGPSGSGKSTLLHCLAGLERLDAGTVTV
EGQLITGLAEPALTRLRARAFGFVFQSFNLLPSLTAGENIIIGQRLSGLPRDEAWHDHLVDSLGLADRLGHRPFELSGGQ
QQRVAVARALVHRPSVLLADEPTGNLDSRSGAGVLEALRRAASDHGQTVVMVTHDPVAAARADRVLMLRDGRVQGELADP
TADSVPAWIRRLEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_3510 YP_003681417.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 48
Ndas_3510 YP_003681417.1 ABC transporter CP001581.1.gene598.p Protein 6e-42 43
Ndas_3510 YP_003681417.1 ABC transporter CP001581.1.gene798.p Protein 1e-39 43
Ndas_3510 YP_003681417.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 41