Gene Information

Name : Ndas_0299 (Ndas_0299)
Accession : YP_003678254.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 372558 - 373253 bp
Length : 696 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: sco:SCO5872 turgor pressure regulator; PFAM: response regulator receiver; transcriptional regu

DNA sequence : 
ATGCGTGTCCTGGTCGTTGACGACGACATGCAGATCATTCGGGCCATGCGGATCAACCTGAGGGCGCGCGGGCACGACGT
GGACACCGCGGCCGACGGGGCGTCCGCTCTGCGGCTGGCCGCGGACAACCACCCCGACGTGGTCCTGCTCGACCTGGGGC
TGCCCGACATGGAGGGCATGGAGGTCATACAGCGGCTGCGCGGGTGGTCTCAGGTGCCGATCATCGTGCTGTCGGCGCGG
CACTCGGCCGGGGAGAAGGTGCGCTGCCTGGACTCGGGCGCCGACGACTACGTCACCAAGCCGTTCGGGATGGACGAGCT
GCTGGCGCGCATGCGCGCGGCGGAGCGGCGGTCGGTGCGCGTGGACGAGGCCCCGGTGGTGCGCACGCCCTCCTTCACCG
TGGACCTGGGCGCCAAGCGGGTGCTGCGGGAGGGCGAGGAGGTCCGGCTCACCCCGACGGAGTGGCACATCCTGGAGATC
CTGGCCCGGCACGCGGGCCAGCTGGTCAGCCAGCGCCAGCTGCTGCACGACGTGTGGGGCCCGGCCTACCAGAGCGAGAC
CAACTACCTGCGGGTGTACATGGCGCAGTTGCGCCGCAAGCTGGAGCCCGACCCGGCGTGCCCGCGCTACCTGATCACGG
AGGCGGGCCGGGGCTACCGCTTCGAGAGGGCGGGCTCGGCCCAGCCCGGGGACTGA

Protein sequence : 
MRVLVVDDDMQIIRAMRINLRARGHDVDTAADGASALRLAADNHPDVVLLDLGLPDMEGMEVIQRLRGWSQVPIIVLSAR
HSAGEKVRCLDSGADDYVTKPFGMDELLARMRAAERRSVRVDEAPVVRTPSFTVDLGAKRVLREGEEVRLTPTEWHILEI
LARHAGQLVSQRQLLHDVWGPAYQSETNYLRVYMAQLRRKLEPDPACPRYLITEAGRGYRFERAGSAQPGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-19 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 2e-19 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 4e-20 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-19 41
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 2e-19 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_0299 YP_003678254.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_0299 YP_003678254.1 two component transcriptional regulator VFG1390 Protein 5e-21 42
Ndas_0299 YP_003678254.1 two component transcriptional regulator VFG1389 Protein 9e-19 41