Gene Information

Name : Ndas_2927 (Ndas_2927)
Accession : YP_003680843.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3497387 - 3498169 bp
Length : 783 bp
Strand : -
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: tfu:Tfu_1494 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; PFAM: ABC transporter related; SMART: ATPase

DNA sequence : 
GTGAGTCTGGTGCTGTCCGCGGAGGGCCTGACCCTGGGGTACGGGGCCGAACCGGTCGTGCGCGACCTCGACCTGGGGGT
GGCCGAGGGCGAGTTCACCGTCATCGTCGGCCCCAACGGCTGCGGCAAGTCCACACTGCTCAAGGCCCTGGGGCGGGTGA
ACAAGCCGATGTCGGGGCGGGTGCTGCTGCACGGCAGTGACGTGCGCGGCCAGCGCGCCAAGGCGGTCGCGCGCCAGATG
GCGCTGCTGCCGCAGAGCCCGACCGCCCCCGAGGGCATCACCGTGCGGGCCCTGGCCGCCCGCGGCCGCTTCCCCTACCA
CACGCTGGTGCGCCAGTGGAGCCCCCAGGACGAGACGGCGATCGGCCGCGCGCTGGAGCTGACCGGGCTGACCGACCTCG
CCGACACCCAGGTGGGCTCCCTCTCGGGCGGCCAGCGCCAGCGCGCCTGGGTGGCGATGGTCCTGGCGCAGGACACCGGC
GTCCTGCTGCTGGACGAGCCCACCACCTACCTGGACATCGCCCACCAGTACGACCTGCTGGAGCTGTTCGCCGACCTGCA
CCGCCGGGGGCGCACGGTGGTCGCGGTCCTGCACGACCTGGCCCAGGCCGCCCGGTTCGCCACCCGCCTGGTGCTGATGG
ACGCGGGCAGGGTGGTCGCCGACGGCCCTCCGGAGGAGGTCGTGACCGCCCGCCTGGTGGGGGAGGTGTTCGGGCTGCCC
TGCGACGTGGTGCCCGACCCGCGCACCCGCACGCCGCTGGTCATCCCGCACGAGCGCGTCTGA

Protein sequence : 
MSLVLSAEGLTLGYGAEPVVRDLDLGVAEGEFTVIVGPNGCGKSTLLKALGRVNKPMSGRVLLHGSDVRGQRAKAVARQM
ALLPQSPTAPEGITVRALAARGRFPYHTLVRQWSPQDETAIGRALELTGLTDLADTQVGSLSGGQRQRAWVAMVLAQDTG
VLLLDEPTTYLDIAHQYDLLELFADLHRRGRTVVAVLHDLAQAARFATRLVLMDAGRVVADGPPEEVVTARLVGEVFGLP
CDVVPDPRTRTPLVIPHERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-59 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-59 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-59 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-59 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-55 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-51 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-49 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-58 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-58 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 9e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2927 YP_003680843.1 ABC transporter BAC0164 Protein 4e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2927 YP_003680843.1 ABC transporter VFG0925 Protein 2e-67 52
Ndas_2927 YP_003680843.1 ABC transporter VFG1042 Protein 4e-51 46