Gene Information

Name : Ndas_2782 (Ndas_2782)
Accession : YP_003680701.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3323332 - 3324099 bp
Length : 768 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: tfu:Tfu_1847 peptide ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YK66 ABC-type antimicrobia

DNA sequence : 
GTGACCGAGTTCACCGTGAAGCCCGACCCGACGGTCACCTCACCGCCGGTGGTGGTCGCCCGGGGCCTCACCAAGACCTA
CGACACCGGCGACAGCCAGGTCCACGCCCTGGCCGGGGTGGACGTGGAGTTCCACCGGGGCGCGTTCACCGCGATCATGG
GCCCCTCGGGGTCGGGCAAGTCCACCCTCATGCACTGCCTGGCCGGACTGGACGTGCCCACCTCGGGCACCGTGCACCTG
GGCCGCACCCAGATCACCGGCCTGCGCGACGCCGAGCTGACCCTGCTGCGCCGCGACCGGATCGGGTTCATCTTCCAGTC
CTTCAACCTGCTGCCGATGCTGACCGCCGAGCAGAACATCCTGCTGCCGTCGCAGATCGCCAAGCGCGGGGTCGACAAGC
AGCGCTTCGACCACATCATCGACGTGGTGGGCCTGCGCGACCGGCTCAACCACCTGCCCGCCAAGCTCTCCGGCGGCCAG
CAGCAGCGCGTGGCCGTGGCCCGCGCCCTGCTCAACGCGCCCGAGGTCGTCTACGCCGACGAGCCCACCGGCAACCTGGA
CTCGCGCTCGGGCACCGAGGTGCTGGAGTTCCTGCGCAACTCGGCCCGCGACCTGAACCAGACCATCGTCATGGTCACCC
ACGACCCCGTGGCCGCCTCCTACGCCGACCGCGTGGTCTTCCTGCGCGACGGACGTCTGGTGGACGAGGTCGTCGAACCC
ACCGCCGAGCTGGTCTCCGCACGGCTGCTGAAGCTGGAAGAGGCCTGA

Protein sequence : 
MTEFTVKPDPTVTSPPVVVARGLTKTYDTGDSQVHALAGVDVEFHRGAFTAIMGPSGSGKSTLMHCLAGLDVPTSGTVHL
GRTQITGLRDAELTLLRRDRIGFIFQSFNLLPMLTAEQNILLPSQIAKRGVDKQRFDHIIDVVGLRDRLNHLPAKLSGGQ
QQRVAVARALLNAPEVVYADEPTGNLDSRSGTEVLEFLRNSARDLNQTIVMVTHDPVAASYADRVVFLRDGRLVDEVVEP
TAELVSARLLKLEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-40 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-40 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-40 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2782 YP_003680701.1 ABC transporter CP001581.1.gene798.p Protein 2e-46 47
Ndas_2782 YP_003680701.1 ABC transporter CP001581.1.gene598.p Protein 2e-47 45
Ndas_2782 YP_003680701.1 ABC transporter NC_008702.1.4606598. Protein 2e-33 45
Ndas_2782 YP_003680701.1 ABC transporter NC_012469.1.7686878. Protein 9e-43 43