Gene Information

Name : Ndas_2438 (Ndas_2438)
Accession : YP_003680364.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2891721 - 2892812 bp
Length : 1092 bp
Strand : +
Note : COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: rxy:Rxyl_0414 transporter permease; PFAM: transporter permease; SPTR: C1YM93 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family

DNA sequence :
GTGGCCCCCCATGTGGCCGGGAGGCCCGTGACGGCCGTGCCCTCGGGAGTCCGGCGCCGGCTGCGGGCCGCGGCCGACGG
TTCCGGGGTTCTCGTCAGTGCCCGCGCCCGCGTCGCCGGGTTGGCGGTGGCGCTGCTGGTCCTGGCCGCGACCCTGCTGG
CGTCGGTCCTGGTCGGTTACGAGCGGCTGTCCGTGGCCGACGTGTACCTCGCCTACGCCGGTTTCACCGGTTCGGACACC
GACTTGGTCGTGCGGCACCTGCGTGTGCCGCGTACCCTGGCCGGGCTGGCGGTCGGCGCGGCCCTGGGCGTGTCCGGGGT
CCTGGCGCAGGGGGTGACCCGCAACCCCCTCGGTGACCCCGGCGTCCTCGGCATCAACGCGGGCGCCTCCCTGGCGGCGG
TCCTCGCGATCAGCGTGTTCGGGGTGTCCGCGCTACTGGGCTACGTCGGCTTCGCCTTCGCGGGCGCGGCGGTCGCCGCC
TGCGTGGTCCACGCCGTGGGGTCGCTGGGTCCGGAGGGGGCCAGTCCGGTCAGGCTCACGCTCGCCGGAGCCGCGGTCTC
GGCCCTGCTGGCTTCGCTGACCTCGGCGATCGTCCTGCGCGACCGCGCGAGCCTGGACGAGTACCGGTTCTGGGTGGTGG
GCTCGCTGGCGGGTGCCGACGGCGCGGCGCTGCTCCAGGCGCTGCCGTTCCTGGCCGCCGGGCTGGTGACGGCGGTGGCG
GTGGCCCGGTCCCTGAACGCGGTGGCGCTCGGCGACGAGCTGGCCCGCTCCCTGGGGACACGGCTGTGGCTGGTGCGCGG
GACGAGCGCCCTGGCGGTGGTGCTCCTGGCGGGGACGGCGACGGCCGTGGCGGGTCCGATCGGCTTCGTCGGGGTCGCCG
TGCCGCACGTGGCGCGGGTCCTGGTCGGCCCCGACCACCGATGGGTGCTGCCCTGGTCGGCGGTGCTGGCGCCCGTCCTG
TTGTTGGCGGCCGACGTCGCGGGCCGGGTGGTGGCGCGTCCCGAGGAGTTGCAGGTCGGCGTCCTCACCGCTCTCATCGG
TGCGCCGTTCTTCGTCCTCGTGGTGCGCGGGCGAAGGGTGGCGGGGCCGTGA

Protein sequence :
MAPHVAGRPVTAVPSGVRRRLRAAADGSGVLVSARARVAGLAVALLVLAATLLASVLVGYERLSVADVYLAYAGFTGSDT
DLVVRHLRVPRTLAGLAVGAALGVSGVLAQGVTRNPLGDPGVLGINAGASLAAVLAISVFGVSALLGYVGFAFAGAAVAA
CVVHAVGSLGPEGASPVRLTLAGAAVSALLASLTSAIVLRDRASLDEYRFWVVGSLAGADGAALLQALPFLAAGLVTAVA
VARSLNAVALGDELARSLGTRLWLVRGTSALAVVLLAGTATAVAGPIGFVGVAVPHVARVLVGPDHRWVLPWSAVLAPVL
LLAADVAGRVVARPEELQVGVLTALIGAPFFVLVVRGRRVAGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-04 45
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-04 45
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-04 45
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-04 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2438 YP_003680364.1 transporter permease VFG0926 Protein 6e-13 47