Gene Information

Name : Ndas_2320 (Ndas_2320)
Accession : YP_003680248.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2767360 - 2768193 bp
Length : 834 bp
Strand : +
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: sgr:SGR_6618 ABC-type Fe3+-siderophore transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR

DNA sequence : 
TTGACCACGGCCCATTCGCTGCTCGTCGAGGACCTGACGCTCGGCTACAAGGACCGCGTCGTCATCGAGTCGCTGGACCT
GACCATCCCGCCCGGCAGGATCACCGCGATCGTGGGCGCCAACGCGTGCGGCAAGTCCACCCTGCTGCGCTCGATGTCGC
GGCTGCTCGCGCCCCGGGTCGGGCACGTGCTCCTGGACGGCAAGGAGGTGCACCGCCTGCCGTCCAAGGAGCTGGCGCGC
ACGCTCGGGCTGCTGCCGCAGTCGCCGATCGCTCCGGAGGGCATCACGGTGAGCGACCTCGTCGGGCGGGGCCGCCACCC
CCACCAGAGGATGCTCTCGCGGTGGAGCCGGGAGGACGACGAGGCCGTGGCCGAGGCGCTGGAGGCGACGCGGACGGTGG
ACCTGGCCGACAGGCCCGTGGACGAGCTCTCCGGCGGGCAGCGCCAGCGCGTGTGGATCGCGATGGCCCTGGCCCAGCGC
ACGGACCTGCTGCTGCTGGACGAGCCCACCACGTTCCTGGACGTCAGCCACCAGGTCGAGGTGCTGGACCTGCTGACCGA
CCTCAACCGTTCGCTGGGGACGACGATCGTGCTGGTCCTGCACGACCTCAACCTGGCCGCGCGCTACGCCGACCACCTCA
TCGCGCTCGCGGGCGGGCGGCTGCACGCCGCGGGCACGCCCGAGGAGGTGCTCACCCCCGAGACGGTGCACGCCGTGTTC
GGCCTGCGCAGCGAGGTGATCACCGACCCCACGTCGGGCAGGCCCCTCATGCTGCCCCTGGGCCGGTACCACAGCACCGG
GGCAGAACTCGGGGAGGAGCAGCTGGCGGAGTGA

Protein sequence : 
MTTAHSLLVEDLTLGYKDRVVIESLDLTIPPGRITAIVGANACGKSTLLRSMSRLLAPRVGHVLLDGKEVHRLPSKELAR
TLGLLPQSPIAPEGITVSDLVGRGRHPHQRMLSRWSREDDEAVAEALEATRTVDLADRPVDELSGGQRQRVWIAMALAQR
TDLLLLDEPTTFLDVSHQVEVLDLLTDLNRSLGTTIVLVLHDLNLAARYADHLIALAGGRLHAAGTPEEVLTPETVHAVF
GLRSEVITDPTSGRPLMLPLGRYHSTGAELGEEQLAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-62 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-53 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-64 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-64 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-53 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-53 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-53 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-53 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-48 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2320 YP_003680248.1 ABC transporter BAC0164 Protein 1e-53 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2320 YP_003680248.1 ABC transporter VFG0925 Protein 3e-67 56
Ndas_2320 YP_003680248.1 ABC transporter VFG1042 Protein 9e-54 50