Gene Information

Name : Ndas_2204 (Ndas_2204)
Accession : YP_003680132.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2634489 - 2635304 bp
Length : 816 bp
Strand : -
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0336 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; PFAM: ABC transporter related; SMART: ATPase

DNA sequence : 
ATGACCATCGCCGACCACTCCGCCTCCCGCCTCAACGGCCGCGACCTCACCCTGGCCTACGAGCAGCGCGTCATCTCCCG
GGACCTGGCCGTCACCATCCCCGACAACTCCTTCACGGTGATCGTGGGACCCAACGCCTGCGGCAAGTCCACCCTGCTGC
GGGCCCTGTCGCGCACCCTCAAGCCCGCGCACGGCCACGTGCACCTGGACGGCAAGGCCATCAGCTCCTACCCCGCCAAG
GAGGTCGCCCGCCGCCTGGGGCTGCTGCCGCAGACCTCCATCGCCCCCGACGGCATCGGCGTGGCCGACCTGGTGGCCCG
CGGCCGCTTCCCCCACCAGGGGTTCCTGCGCCAGTGGTCCAAGCAGGACGAGGCGGTCGTGGCCGAGGCCATGGCCTCCA
CCGGCGTGGCCGAACTGGCCGAGCGGTCGGTGGACGAGCTCTCGGGCGGGCAGCGCCAGCGCGTGTGGCTGGCCATGGTC
CTGGCCCAGCAGACCCCCCTGCTGCTGCTGGACGAGCCCACCACCTACCTCGACATCGCCCACCAGATGGACATGCTCGA
CCTGTGCGCGCAGCTGCACGCCGAACGCGACTACACCCTGGTCGCGGTCCTGCACGACCTCAACCACGCCTGCCGCTACG
CCACCCACCTGATCGTGATGAAGGAGGGCGCCATCGTCGCCGAGGGCGACCCCTCCACCGTGGTCACCGCGTCCCTGGTC
GAGGAGGTCTTCGGCCTGCCCGTGCGCATCATCCCCGATCCCGAGACCGACACCCCGATGATCGTGCCCGTGGACCGCCG
CGGCGCCGCCCGCTGA

Protein sequence : 
MTIADHSASRLNGRDLTLAYEQRVISRDLAVTIPDNSFTVIVGPNACGKSTLLRALSRTLKPAHGHVHLDGKAISSYPAK
EVARRLGLLPQTSIAPDGIGVADLVARGRFPHQGFLRQWSKQDEAVVAEAMASTGVAELAERSVDELSGGQRQRVWLAMV
LAQQTPLLLLDEPTTYLDIAHQMDMLDLCAQLHAERDYTLVAVLHDLNHACRYATHLIVMKEGAIVAEGDPSTVVTASLV
EEVFGLPVRIIPDPETDTPMIVPVDRRGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-67 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-67 52
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-67 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-67 52
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-64 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-62 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-62 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2204 YP_003680132.1 ABC transporter BAC0164 Protein 1e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2204 YP_003680132.1 ABC transporter VFG0925 Protein 8e-81 57
Ndas_2204 YP_003680132.1 ABC transporter VFG1042 Protein 9e-51 46