Gene Information

Name : Ndas_2142 (Ndas_2142)
Accession : YP_003680070.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2563969 - 2564715 bp
Length : 747 bp
Strand : +
Note : COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: nfa:nfa24350 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YMN5 ATPase component of Mn/Zn ABC-type transport

DNA sequence : 
GTGAACGCCGCCATCGAGGTCACCGACGCCACCGTCCGCTACGGCGACGTCCTGGCGCTGGACGGCGTGAGCCTGTCCGT
CGCCCCGGGCCGCGTCTGCGGCCTGCTGGGCACCAACGGGTCGGGCAAGTCCACCCTGTTCAAGACCGTGCTGGGCCTCG
TCCCCGCCGACGGGGGGCGGGTGCGGATTTTGGGGCACACCGGGGCCGCCGCCCGCCGCCGCGGGCTGGTGGGCTACGTG
CCCCAGTCCGAACAGGTCGACTGGGCCTTCCCGGTCCGCGTGCGCGACGTGGTGATGATGGGCCGCTACGGACGCATGGG
ACAGCGGCGGCGCCCCCGCCCCGCCGACCGGGAGGCGGTCGAGCACGCCCTGGACCGCACCCACCTGGGCGACCTGGCCG
ACCGCCAGATCGGCGCGCTCTCCGGCGGCCAGCGCAAACGCGCCTTCGTGGCCCGCGCCATCGCCCAGGGCGCCGACGTG
CTCCTGCTCGACGAGCCCTTCGCCGGGGTCGACAAGCGTTCGGAGGGGCGCATCACCGAACTGCTGCTGCAACTGCGCGG
CGAGGGCCACACCCTGCTCGTGTCCACCCACGACCTGGCCCAGGTGCCCGCCCTGTGCGACGAGGCGGTGCTGCTCCAGC
GCCGCGTCGTGGCGCACGGCGCCCCCGAGGAGGTCCTGCGCCCGGAGACCCTCATGGAGGCCTTCGGGGTCCACACCGAC
GAGGAGGGAACGGCATGGACGCGCTGA

Protein sequence : 
MNAAIEVTDATVRYGDVLALDGVSLSVAPGRVCGLLGTNGSGKSTLFKTVLGLVPADGGRVRILGHTGAAARRRGLVGYV
PQSEQVDWAFPVRVRDVVMMGRYGRMGQRRRPRPADREAVEHALDRTHLGDLADRQIGALSGGQRKRAFVARAIAQGADV
LLLDEPFAGVDKRSEGRITELLLQLRGEGHTLLVSTHDLAQVPALCDEAVLLQRRVVAHGAPEEVLRPETLMEAFGVHTD
EEGTAWTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-42 50
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-42 50
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-43 50
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-41 50
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-41 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2142 YP_003680070.1 ABC transporter BAC0350 Protein 5e-43 50
Ndas_2142 YP_003680070.1 ABC transporter BAC0440 Protein 8e-43 47
Ndas_2142 YP_003680070.1 ABC transporter BAC0400 Protein 5e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_2142 YP_003680070.1 ABC transporter VFG0526 Protein 5e-43 50