Gene Information

Name : Ndas_1823 (Ndas_1823)
Accession : YP_003679757.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2229534 - 2230259 bp
Length : 726 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: sen:SACE_6095 two-component system, response regulator; PFAM: response regulator rec

DNA sequence : 
ATGCCCCACGCGCCCTCCGGCACCGCCGCTCCGTCGGCCCGGGCCCTCATCGTCGAGGACGAGCCCAACATCCTCGAACT
GCTCACCGCCTCCCTGGAGCTGAGCGGCTTCGCCACGCGCGGCGCGCCCGACGCGGAGGCCGCCCTGGCCGCGCTGGACG
GGTTCACCCCCGACATCGCCGTCCTGGACGTGACCCTGTCCGGCCGCAGCGGCCTGGACCTGGCCGGTGACCTGCGCGGG
GTCGTGCCAGGCCTGCCGGTGCTGTTCCTGACCGCGCGCGACACGGTCCAGGACCGGGTGGCGGGCCTGCGGGCCGGCGC
CGACGACTACGTCACCAAGCCCTTCAGCCTGGAGGAGGTCGTGCTGCGGCTGAACGCGATCCTGCGCAGATCGGGCCGCC
GCGGTTCCGAGGGCGCCGAGCCCCTGCGCTACGCCGACCTGGAACTGGACGAGGAGGGGCACCAGGTGCGCCGCGCGGGC
GCGCCTGTGCGGCTCTCGCCCACCGAGTTCGCGCTCCTGCGCTACCTCCTGCTCAACGCGGGCAAGGTCGTCAGCAAGGC
GCAGATCCTGGACCGGGTGTGGGGCGGGGAGAGCGACGACATCCGCGTCGTGGAGACCTACGTCAGCTACCTGCGCCGCA
AGGTCGACGCGGGCCGCCCCGCCCTGATCCACACCGTGCGGGGCGTGGGCTACAGCCTGCGCCTGGCGGCCGGGGGGAAC
GGGTGA

Protein sequence : 
MPHAPSGTAAPSARALIVEDEPNILELLTASLELSGFATRGAPDAEAALAALDGFTPDIAVLDVTLSGRSGLDLAGDLRG
VVPGLPVLFLTARDTVQDRVAGLRAGADDYVTKPFSLEEVVLRLNAILRRSGRRGSEGAEPLRYADLELDEEGHQVRRAG
APVRLSPTEFALLRYLLLNAGKVVSKAQILDRVWGGESDDIRVVETYVSYLRRKVDAGRPALIHTVRGVGYSLRLAAGGN
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_1823 YP_003679757.1 two component transcriptional regulator BAC0197 Protein 9e-27 42
Ndas_1823 YP_003679757.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-22 41
Ndas_1823 YP_003679757.1 two component transcriptional regulator BAC0125 Protein 1e-25 41
Ndas_1823 YP_003679757.1 two component transcriptional regulator BAC0308 Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_1823 YP_003679757.1 two component transcriptional regulator VFG1386 Protein 1e-50 54
Ndas_1823 YP_003679757.1 two component transcriptional regulator VFG1390 Protein 1e-37 45
Ndas_1823 YP_003679757.1 two component transcriptional regulator VFG1389 Protein 3e-31 44