Gene Information

Name : Ndas_1610 (Ndas_1610)
Accession : YP_003679545.1
Strain :
Genome accession: NC_014210
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1971928 - 1972875 bp
Length : 948 bp
Strand : +
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: sgr:SGR_6642 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YJN4 ABC-type cobalamin/Fe

DNA sequence : 
GTGCGCCAGGCGCCCCCGACCGACGGCCGACGGCCCGAAGGAGGGGACCGGACGCGGCGCGGCGCGCCCGCCGGGGCCGG
CCTGCACGCCGAACGGGTGAGCCGCCTGATCGGCGGAGGGCTCGTCCTGGACGGCGTCACCCTGGCTCCGCGCCCCGGCG
AGACCGTCGGCCTGCTCGGCCCCAACGGTTCGGGCAAGTCCACGCTGCTGCGGCTGCTCTCCGGTGTCCTGGCGCCCTCC
GCGGGCGTGGTCGCCCTCGACGGGACGCCGCTCGACCGGACCGCGCGCCGGGCGGTGGCGCGGCGCGTGGCCGCCGTCGA
ACAGAACGCGCACACCCAGACCGAGCTGACCGTCCGCGACGTGGTGGCCCTGGGGCGCGTCCCCCACCGCCGCGCCTGGA
CGCCCATGTCCGCGGCCGACGCGGACGCCGTCGCGGCGGCTCTGGAGCGCACCGGCCTGACCGGTACCGCCGACCGGTCC
TGGCACACGCTCTCCGGCGGTGAGCGCCAGCGCGCCCAGATCGCCCGAGCCCTGGCCCAGGAGCCGAGCGAGCTGCTGCT
GGACGAGCCGACCAACCACCTCGACATCCAGTACCAGCTCGACCTCATGGAACTGGTCGCGGGCCTGCCGGTCACCACCG
TCATCGCCCTGCACGACCTCAACCTGGCCGCGATGTACTGCGACCGGCTGCTGGTGCTGTGCGGCGGGCGCGTCGTCGCC
GAGGGCACGCCCCCGCGGGTCCTGACCCCCGCCCTCATCGAGGAGGTCTACGGGGTCCGGGCCGAGGTCGAACCCGGACC
CGGGCACCCGGTGATCCGCTTCCTGCGCCGCGGCTCCGAGCCGCCGCGCCACAGTGACGCCCCCGCCGCCGAGGCGCGGA
CGACCCCCGGACCCGAACGGTCCGACCGACGATGGGGAGCCAACCCCGAAGGAGGAATCCGGCCATGA

Protein sequence : 
MRQAPPTDGRRPEGGDRTRRGAPAGAGLHAERVSRLIGGGLVLDGVTLAPRPGETVGLLGPNGSGKSTLLRLLSGVLAPS
AGVVALDGTPLDRTARRAVARRVAAVEQNAHTQTELTVRDVVALGRVPHRRAWTPMSAADADAVAAALERTGLTGTADRS
WHTLSGGERQRAQIARALAQEPSELLLDEPTNHLDIQYQLDLMELVAGLPVTTVIALHDLNLAAMYCDRLLVLCGGRVVA
EGTPPRVLTPALIEEVYGVRAEVEPGPGHPVIRFLRRGSEPPRHSDAPAAEARTTPGPERSDRRWGANPEGGIRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-32 48
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-23 46
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-23 46
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-23 46
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-23 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-27 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-20 42
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 5e-25 41
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_1610 YP_003679545.1 ABC transporter BAC0164 Protein 1e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_1610 YP_003679545.1 ABC transporter VFG0925 Protein 7e-24 44
Ndas_1610 YP_003679545.1 ABC transporter VFG1042 Protein 1e-27 43