Gene Information

Name : Tmath_0052 (Tmath_0052)
Accession : YP_003675850.1
Strain : Thermoanaerobacter mathranii A3
Genome accession: NC_014209
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 59718 - 59921 bp
Length : 204 bp
Strand : +
Note : KEGG: tpd:Teth39_0033 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAACAAACTAAAAGAGTTAAGAATAAAATATAAACTCACACAAAAAGAATTAGCAAAAAAACTAGGAGTAACGCCAGA
TTATATTTCTCAAATTGAAGGTGGTAGAATTCCCGGTATGGAAACTGCAATAAAGATTGCAAATTTCTTTAATACTACTA
TAGATGATATTTTTTTGGCAAATAATCGAACTAAAAGTTCGTAA

Protein sequence :
MNKLKELRIKYKLTQKELAKKLGVTPDYISQIEGGRIPGMETAIKIANFFNTTIDDIFLANNRTKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-04 41
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 9e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmath_0052 YP_003675850.1 XRE family transcriptional regulator VFG2168 Protein 3e-04 41
Tmath_0052 YP_003675850.1 XRE family transcriptional regulator VFG2175 Protein 3e-04 41