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Name : Tmath_0505 (Tmath_0505) Accession : YP_003676273.1 Strain : Thermoanaerobacter mathranii A3 Genome accession: NC_014209 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 530779 - 532449 bp Length : 1671 bp Strand : - Note : KEGG: csc:Csac_2428 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGCAAAGAAAATGGTGGAAAGAGGCAGTTGTATATCAAATATATCCTCGCAGTTTTTATGATACAAATGGTGATGGAAT TGGAGATTTACAAGGCATAATAACTAAACTTGACTATTTAAAAGAACTTGGAATTGATGTTATTTGGCTAAACCCAATTT ACCAATCGCCAAATGCAGATAACGGTTATGATATTAGTGACTATTATGGTATTATGGACGAGTTTGGAACAATGTCAGAT TTTGATGAGCTTTTAAGCCAAGCACACAAACGAGGTATAAAGATTGTAATGGATTTGGTTGTAAACCATACATCAGATGA GCATAAGTGGTTTTTAGAATCAAGAAAATCAAAGGATAATCCATATAGAGAGTTTTATTTTTGGAAAAAGGGCAAAAATG GCCGTCCACCTAACAACTGGACATCATTTTTCAGTGGCTCTGCCTGGGAATATGACCCACTAACCAATGAATATTACCTA CATCTTTTTGCTGTCAAACAACCAGATCTAAACTGGGATAACCCTATGGTCAGACAAGAGATATACAAAATGATGAAATG GTGGCTTGACAAAGGTATTGATGGGTTTAGAATGGATGTTATAAATCTAATCTCAAAAGTGGAAGGATTACCAGATGATA TACAAGGCGAAAGGCAGGGTGGCCTTGTTGGCGCAAAATATTATGCGAACGGTCCCAAGGTTCATCAATACTTGCAAGAA ATGAACAAAGAAGTTTTAAGCAAGTATGACATCATGACCGTTGGTGAAACACCATTTGTAACCCCTGAAATTGCAAAATT ATATGTGGAATATGACAGAAATGAATTAAACATGTTATTTCACTTTGAACTCATGGACATTGACTGCGGTAATAGCAAAT GGGATATAAAACCATGGAAGCTTACAGATTTCAAGAAAATCATGTACAAATGGTACTTAGCGTTAAAAGATAAAGGCTGG AATTCGCTATACTTGAACAATCATGATCAACCAAGAATGGTCTCACGTTTCGGAAATGATAAAGAATACAGAGTAGAATC AGCAAAACTTTTGGCAACATTTCTTCATACATGGCAAGGAACGCCGTATATCTATCAAGGTGAAGAGATTGGTATGACGA ATTGCAAGTTTGAAAGCATTGATGAATTTAGAGATATAGAAACCCTGAATTGGTATAACGATATGAAAAAGCAAGGAAAA AGCGATGAGAAACTTTTAGATATTTTGAACAAGCGCAGTCGAGACCATGCGAGAACACCAATGCAATGGGATGATACTAA AAACGCAGGTTTTACCACAGGTATACCATGGATTAAGGTAAATCCTAATTATAAAGAAATAAATGTAAAAAAAGCATTAG AGGATAAAAATTCTATATTTTATTATTACAAGAAGCTAATTGAGCTTAGGAAAAAATACCCTGTTATTGTATACGGCAAT ATCACTATGCTATATGAGGATGATGAAAAAATCTTTGCATATACAAGAAGTTACGGCAATCAAAGGCTTTTGGTTGTGCT GAACTTTTCAGAAGATAATGTTAATTTTGCTGTACCAAAGGAGATGTTCACTAACTCCCCTCAGCTTTTAATAAGCAACT ATCCAGTTAATGATAATATTCAAGAAAAAGTTATTTTAAGACCATATGAAGCAAGGGTATATAAAATATGA Protein sequence : MQRKWWKEAVVYQIYPRSFYDTNGDGIGDLQGIITKLDYLKELGIDVIWLNPIYQSPNADNGYDISDYYGIMDEFGTMSD FDELLSQAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDNPYREFYFWKKGKNGRPPNNWTSFFSGSAWEYDPLTNEYYL HLFAVKQPDLNWDNPMVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDIQGERQGGLVGAKYYANGPKVHQYLQE MNKEVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFELMDIDCGNSKWDIKPWKLTDFKKIMYKWYLALKDKGW NSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATFLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNWYNDMKKQGK SDEKLLDILNKRSRDHARTPMQWDDTKNAGFTTGIPWIKVNPNYKEINVKKALEDKNSIFYYYKKLIELRKKYPVIVYGN ITMLYEDDEKIFAYTRSYGNQRLLVVLNFSEDNVNFAVPKEMFTNSPQLLISNYPVNDNIQEKVILRPYEARVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-150 | 58 |
