|
Name : Tmath_0045 (Tmath_0045) Accession : YP_003675843.1 Strain : Thermoanaerobacter mathranii A3 Genome accession: NC_014209 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 50872 - 52143 bp Length : 1272 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: tpd:Teth39_0029 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGATAGATGTAAAAAGAATAAGAGGCAATCCTGAAGCTATTAAGAGGGCTATTGAGCTTAAAAAGGACAAGGCGGATAT AGATAAATTTTTAAAACTAGATGAAAGAAGAAGACAGATGTTAGTAGAATTAGAAGCATTAAAAAATAGGCGAAATGTAG AATCAGATAATATTGCAAAACTTAAAAGAGAAGGAAAAGATGTCAGCGACTTGATAGCTGAAATGAAAGAATTGTCCAGC AAAATAAAAGAAATGGAGCAAGAAGTAAAAGAGGTAGAAGAACAATTGGAGGGAATTTTGTGGACAATCCCTAATATACC TCATGAAAGTGTGCCAATAGGGGATAGCGATGAAGATAATGTTGAAGTAAGAAGATGGGGTGAACCGAGAAAATTTGACT TTGAACCAAAATCTCATTGGGAAATAGGAGAAGAACTGGATATTTTAGACTTTGAAGCTGCAGCGAGAGTAACAGGCTCA AGGTTCACTTTTTACAAAGGTCTTGGGGCTCGTTTAGAAAGGGCACTTATAAATTTCATGCTGGACTTACACGTTGAAAA ACATGGGTATACTGAGGTGTTTCCTCCATTTATAGTACATAGAAGGAGTATGCTTGGCACAGGACAACTTCCTAAATTTG AAGAAGATGCTTTCAAGGTTTACGGTACTGATTATTTTTTGATACCCACGGCAGAAGTACCTGTAACCAATATGTACAGA GATACAATAATAGATGGTGACAAGCTTCCAATATATCATTGTGCTTATAGCGCATGTTTCAGACAAGAAGCAGGTTCCGC GGGAAGAGATACAAGAGGACTTATAAGGCAGCACCAATTCAACAAAGTTGAACTTGTCAAATTTACAGAACCAGACAAAT CCTATGAAGAATTAGAAAAAATGACTAAAGATGCGGAAGAGGTTTTACAACTGTTGGGACTTCCTTATAGAGTGGTGGCC ATATGCACAGGTGATTTAGGCTTTACTGCTTCAAAAAAATATGACATAGAAGTGTGGATGCCAAGCTATGGAAGATATGT AGAAGTTTCCTCTTGTAGCAATTGTGAAGATTTTCAAGCTAGAAGAGCTAATATAAAGTACAGACCTAAAGATGGAAGCA AAGCACAATATGTTCACACCTTAAATGGGTCTGGCGTCGCTGTAGGAAGGACCTTTGCTGCAATATTAGAAAATTATCAG CAAGAAGATGGTTCAGTTGTCATACCAGAAGTTTTAAGACCTTACATGAGAGTAGATATTATAAAGAAATAA Protein sequence : MIDVKRIRGNPEAIKRAIELKKDKADIDKFLKLDERRRQMLVELEALKNRRNVESDNIAKLKREGKDVSDLIAEMKELSS KIKEMEQEVKEVEEQLEGILWTIPNIPHESVPIGDSDEDNVEVRRWGEPRKFDFEPKSHWEIGEELDILDFEAAARVTGS RFTFYKGLGARLERALINFMLDLHVEKHGYTEVFPPFIVHRRSMLGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNMYR DTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVA ICTGDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKYRPKDGSKAQYVHTLNGSGVAVGRTFAAILENYQ QEDGSVVIPEVLRPYMRVDIIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-117 | 59 |
