Gene Information

Name : Tmath_1957 (Tmath_1957)
Accession : YP_003677655.1
Strain : Thermoanaerobacter mathranii A3
Genome accession: NC_014209
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1969028 - 1971478 bp
Length : 2451 bp
Strand : -
Note : KEGG: tpd:Teth39_0342 ATPase; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGGCAATGTTTGGAAGATTTACAGAAAGAGCTCAAAAAGCTCTTTATTTGGCACAGGAGGAAGCGAGGTCTTTTTATCA
TAATTATGTAGGGACAGAGCATATTTTATTGGGATTATTAAAAGAAAATGAAGGTATAGCAGCAAGAACTTTAAAAAAAT
TAGGAGTAACTTATGAAACTACAAGAGAAAAGGTACTATCTTTGATTGGAATGGGAAATATCCCGGGTGACGTGGTAGGA
TATACACCACGGGCTAAAAGGGTATTGGAATTGAGTCTTAGTGAGGCAAGAAGATTTAATACCAGCTATATTGGAACCGA
GCACATTTTATTAGGGATTTTAAGAGAGGGTGAAGGAGTCGCTGTACGAATTTTAATGGAACAAGGTATAGATTTCAATA
GAGTGAGAGAGGAGATTGTAAAGATGCTTAACGAAGAGCCTTCAGGAGGACCTGCAAAGGCAACAAAGGTTAAAAATACA
AATACCCCTACTCTAAATCAATTTGGAAGAGATTTGACCGAGCTTGCAAGAGATGGTAAACTTGACCCTGTAATAGGAAG
AGAAAAAGAGATTGAAAGAGTTATACAGATTCTGAGCAGGAGGACAAAAAATAATCCTGTCCTAATAGGTGAACCGGGTG
TTGGTAAAACTGCTATTGTAGAAGGACTTGCTCAAAAGATTGTAGAAGGTGAAATTCCTGAAATTTTGAAAGATAAAAGA
GTTGTAACTTTAGACATGGCTTCTATGGTAGCAGGTACAAAATATAGAGGCGAATTTGAAGATAGGTTAAAAACAGTATT
AAATGAGGTTATAAAGGCAGGAAATGTGATACTATTTATAGATGAGATGCACACTTTAATTGGAGCAGGTGCAGCGGAAG
GTGCAATAGATGCATCAAACATTTTAAAACCGGCACTTGCAAGAGGTGAAATTCAAGTAGTTGGAGCAACTACTTTGGAG
GAATACAGAAAATATGTAGAAAGAGACCCTGCATTAGAAAGAAGATTCCAACCAATAATTGTAGATGAACCAACTGTGGA
AGAGACTATTGAAATATTGAAAGGATTAAGAGATAAATATGAAGCCCATCATAGAGTTAAAATTACTGATGAAGCTTTAG
AGGCAGCGGCTAGACTTTCCCACAGATATATTGCAGATAGATTTTTACCTGACAAAGCTATTGACTTAATAGATGAAGCT
GCTTCGCGCGTAAGGTTGAAGACAGTGACTGCACCTCCAGAGATAAAAGAATTGGAAGATAAAATCAATGACCTCATAAA
AGAAAAGGAAGAAGCGATAAAGACTCAAGAGTACGAAAAAGCTGCGAAAATAAGAGATGAAGAACAAAAATTAAGAGAAG
AATTGGAAAAATTAAAAGCCAAATGGCAACAAAATTCTCTTTCTAATGAAAAAAGTGTGGGACCAGAAGAAATTGCACAA
GTTGTATCTCTGTGGACAGGAATACCTGTAAAAAAATTGGCTGAAGAAGAATCAGAAAGGCTGTTACATTTAGAAGAGAT
ATTGCATGAAAGAGTCATAGGGCAAGATGAAGCTGTAGAAGCAGTAGCAAGGGCTATAAGAAGGGCAAGAGTGGGCTTAA
AAGATCCAAAAAGACCAATAGGTTCGTTTATCTTCTTGGGTCCTACTGGAGTTGGTAAAACAGAACTTACAAAGGCTTTG
GCAGAAGCACTTTTTGGCGATGAAAATGCCATGATTAGGCTTGATATGTCAGAGTATATGGAAAGGCATACCGTCTCAAA
ACTTATTGGTTCACCTCCAGGATATGTAGGATTTGAAGAAGGTGGACAATTAACAGAAAAAGTAAGAAGAAAGCCCTATT
CAGTAATCTTGCTGGATGAAATTGAAAAGGCCCATCCTGACGTGTTTAACATTCTCCTTCAAATATTAGAGGATGGAAGA
CTCACTGATTCAAAAGGTAGGACTGTAGACTTCAAAAATACCGTTATAATCATGACATCAAACGTAGGAGCAGAATTGCT
AAAAAAACAAGCTACTTTAGGATTTATGCCACAAGAAAAAGAAGATAAAGCTTCTCATGAGAAGGTAAAAGAGACATTAA
TGGCAGAATTAAGAAAGACCTTTAGACCTGAATTCTTAAATAGGGTGGATGAAATAATTGTATTCCATCAGTTGACAAAA
GAAGACATTGAAAAGATTGCTGATATAATGATGAAAGAATTGAATGATAGATTAAAAGAGAACAATATTAAACTGGAGTT
TACCCCTGAAGGTAAAGAGGAAATTATTAAACAAGGATATGATCCAAACTACGGTGCAAGGCCTTTAAGAAGAGTTATAC
AAAGGATTGTAGAGAATCAATTGTCTGAACTTATGTTGCAGGGGAAAGTAAAACCTGGAGATGAGCTTATAGTGACTGCA
AAAGATGGAAAAATAGAGTTTGTGAAAAAAGATGCGGTTCAAAAGACTTAG

Protein sequence :
MAMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETTREKVLSLIGMGNIPGDVVG
YTPRAKRVLELSLSEARRFNTSYIGTEHILLGILREGEGVAVRILMEQGIDFNRVREEIVKMLNEEPSGGPAKATKVKNT
NTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKR
VVTLDMASMVAGTKYRGEFEDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLE
EYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADRFLPDKAIDLIDEA
ASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYEKAAKIRDEEQKLREELEKLKAKWQQNSLSNEKSVGPEEIAQ
VVSLWTGIPVKKLAEEESERLLHLEEILHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKAL
AEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGR
LTDSKGRTVDFKNTVIIMTSNVGAELLKKQATLGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTK
EDIEKIADIMMKELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKPGDELIVTA
KDGKIEFVKKDAVQKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmath_1957 YP_003677655.1 ATPase VFG0079 Protein 0.0 63
Tmath_1957 YP_003677655.1 ATPase VFG0080 Protein 1e-149 54