Gene Information

Name : Tmath_1425 (Tmath_1425)
Accession : YP_003677148.1
Strain : Thermoanaerobacter mathranii A3
Genome accession: NC_014209
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1420343 - 1421533 bp
Length : 1191 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: tpd:Teth39_0884 cystathionine gamma-lyase

DNA sequence : 
ATGGAAGCGGATAAAAACTATCGGTTTGATACAAAGGCAATTCATGGGACTAGGTTTAATAGAAATCCTGAAAATGCTTT
GAATCCTCCAATTTTCCAAACGACTACTTTTGTTTTTGATGACCTTGAACATGTTGAAAAGGTGATGTCTTTTGAGTCTC
AAGACTATGTTTATACAAGAGGTAATAATCCTACTTTAAGATTATTTGAAAACAGATTAGCGGAGTTAGAATATGGCAAA
GGGGCAGTAGCTTTTTCTTCAGGTATGGCTGCAATTTCCTCGGTTTTATTTTCTCTTTTAAAACCCAAAGATACTGTAAT
AGTTCATAAGACTCTGTATGGTTCAAGTTATAACGTGGTGACAAATATATTGACTAAATATGGAATAAATTATAAAATAG
TGGACCTTACAGATATAAGCGAATTAGAAAAAAGTATAGATGACTCCACAAAAGTTGTGTATTTTGAGACTCCTTCTAAT
CCGAACCTGTCAATTATAGATATTGAAGAGGTTGCAAGGGTGTGCCATAAAAAAGGTATTAAAATTGTTGTTGATAACAC
TTTTGCTACCCCCTATTTTCAAAATCCTCTTCTTTTAGGAGCCGATGTAGTTGTTCATAGTGCTACTAAATATATAGGGG
GTCACGGTGATGCACTTGGGGGAGTTGCAGTTTCCCAAGATGAAAAGTATATACATTACTTAAAATTTGATTATATGTGT
GAATTTGGTGGGGTAATGAGCCCTTTCAATGCTTGGCTGATGTTGAGAGGCATAAAGACTTTAGGCATAAGAATGAGACA
ACATGAAAAAAATGCAATAGAAGTAGCAAATTTTTTACATTCGCATCCTAAAGTAAAAAACGTTATGTATCCTGGTCTTA
AAAGTTTTAAAGGTTATGAAATAGCGAAAAAGCAAATGAGAGGATTCGGTGCGATGATAAGTTTTGAAATAGAAGGTGGT
CTTAAAGAAATAGATAAATTTGTAAATAATTTAAGACTTTGTCAGTTGGCAGTGAGTTTAGGTGATACAGAAACTTTGAT
TGAGGTGCCTGCTTTGATGACACACAGGGGATATCCAAAAGAAAAGCTTGAGGAATTTGGATTCTCCCAAAATCTTGTGA
GAATTTCAGTGGGCCTTGAAAATTATGAAGATATAATAGAAGATTTGGAAGAAGCTTTGAAAAAAGTTTAA

Protein sequence : 
MEADKNYRFDTKAIHGTRFNRNPENALNPPIFQTTTFVFDDLEHVEKVMSFESQDYVYTRGNNPTLRLFENRLAELEYGK
GAVAFSSGMAAISSVLFSLLKPKDTVIVHKTLYGSSYNVVTNILTKYGINYKIVDLTDISELEKSIDDSTKVVYFETPSN
PNLSIIDIEEVARVCHKKGIKIVVDNTFATPYFQNPLLLGADVVVHSATKYIGGHGDALGGVAVSQDEKYIHYLKFDYMC
EFGGVMSPFNAWLMLRGIKTLGIRMRQHEKNAIEVANFLHSHPKVKNVMYPGLKSFKGYEIAKKQMRGFGAMISFEIEGG
LKEIDKFVNNLRLCQLAVSLGDTETLIEVPALMTHRGYPKEKLEEFGFSQNLVRISVGLENYEDIIEDLEEALKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-56 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmath_1425 YP_003677148.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-79 44