Gene Information

Name : M301_1980 (M301_1980)
Accession : YP_003674929.1
Strain : Methylotenera versatilis 301
Genome accession: NC_014207
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2207872 - 2209416 bp
Length : 1545 bp
Strand : -
Note : KEGG: mmb:Mmol_1686 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGAGCAGCCAAGAAAATAACCAGCAAAATAATGAAGTAATCCCAGTAGATGAAAACCATGTGATTGCAGAGCGTCGTGA
GAAGCTAAAATCCATCCGTGAAGCCACTGGTGGCGTGGCGTTTCCTAACGATTTTAAGCCGCAACATAAAGCCGCTGATT
TAATCGCAGCCTATGCTAATCAAGAAAATGAAGCATTTGAAGCAACACCAGTTAACGTTGTAGTGGCTGGCCGCATGATG
TTAAAACGTGTGATGGGTAAAGCAAGCTTTGCGACCATACAAGATGGTAGCGGCGCAAATGCAGGCAGCCGTATTCAGCT
TTATGTAGCCAAAGACATGATCAGTGAAGAAGTCTACGAGCAATTTAAACATTGGGATTTGGGCGACTTTTTAGGTGCAA
CTGGCTATCTGTTTAAAACTAAAACAGGCGAGCTTTCAATCAAAGTGACTGAAATTCGTTTGCTAACAAAATCTTTACGC
CCATTGCCAGAAAAATTCCACGGTTTGCAAGATCAAGAAGTTAAATATCGCCAACGTTACGTTGATTTAATTACCAGCGA
AGAAACGCGTGCGACTTTTGTTGCACGTAGCAAAGTCGTTTCTGCAATCCGGAACTTCATGATTCAAAATGAATTCTTAG
AAGTTGAAACGCCGATGTTGCACCCTATTCCAGGTGGTGCTTCAGCTAAGCCATTCATTACGCATCACAATGCTTTAGAT
ATGCAAATGTACATGCGTATTGCTCCAGAACTATATTTGAAACGCTTAGTCGTTGGCGGTTTTGAGCGTGTGTTTGAAGT
AAATCGTAACTTCCGTAACGAAGGTTTGAGCGTTCGTCATAATCCAGAATTCACCATGATGGAATTTTATGCAGCTTATA
CTGACTATCAATGGTTGATGGACTTTACTGAAAACTGTATTCGCACTGCAGCCATCGCAGCACGCGGTACTGCCGTGCTG
GAGTATCAAGGTCGTGAGCTAGATTTGAGCAAGCCATTCCAACGCTTAACGATTGTTGGCGCTATTCAAAAATATGCACC
GCAATACACGCTTGGGCAGTTAAATGATGAAGCTTTCTTACGTGCAGAAATCCTTAAGCATGGCACGAAACCATTTGACC
ATGCAGGTTTGGGCGCATTGCAATTGGCATTGTTTGAAGAAACTGCTGAAAGCCAATTATGGGAGCCAACTTATATTATT
GATTACCCAGTTGAAGTTTCACCATTGGCACGTGCATCAGACAAAAACCCAGAAATCACTGAGCGTTTTGAGTTGTTTGT
GACTGGTCGCGAAATCGCAAACGGGTTCAGCGAGTTAAATGATGCTGAAGACCAAGCCGCACGTTTCCATGCGCAAATGA
AAGCCAAAGAAGCGGGTGACCATGAAGCGATGTTCTATGATGCGGACTTTATTCGCGCATTGGAGTACGGCATGCCGCCA
GCAGGCGGTTGCGGTATCGGTATTGATCGCTTAGTCATGATGATCACCGACAGCGCAAGTATCCGTGATGTAATTTTATT
CCCGCACATGCGCGCTGAATCTTAA

Protein sequence :
MSSQENNQQNNEVIPVDENHVIAERREKLKSIREATGGVAFPNDFKPQHKAADLIAAYANQENEAFEATPVNVVVAGRMM
LKRVMGKASFATIQDGSGANAGSRIQLYVAKDMISEEVYEQFKHWDLGDFLGATGYLFKTKTGELSIKVTEIRLLTKSLR
PLPEKFHGLQDQEVKYRQRYVDLITSEETRATFVARSKVVSAIRNFMIQNEFLEVETPMLHPIPGGASAKPFITHHNALD
MQMYMRIAPELYLKRLVVGGFERVFEVNRNFRNEGLSVRHNPEFTMMEFYAAYTDYQWLMDFTENCIRTAAIAARGTAVL
EYQGRELDLSKPFQRLTIVGAIQKYAPQYTLGQLNDEAFLRAEILKHGTKPFDHAGLGALQLALFEETAESQLWEPTYII
DYPVEVSPLARASDKNPEITERFELFVTGREIANGFSELNDAEDQAARFHAQMKAKEAGDHEAMFYDADFIRALEYGMPP
AGGCGIGIDRLVMMITDSASIRDVILFPHMRAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-131 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M301_1980 YP_003674929.1 lysyl-tRNA synthetase VFG1668 Protein 1e-131 56