Gene Information

Name : M301_1848 (M301_1848)
Accession : YP_003674799.1
Strain : Methylotenera versatilis 301
Genome accession: NC_014207
Putative virulence/resistance : Unknown
Product : integron integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2074008 - 2074949 bp
Length : 942 bp
Strand : -
Note : KEGG: mfa:Mfla_0410 integron integrase; TIGRFAM: integron integrase; PFAM: integrase family protein

DNA sequence : 
ATGGATCGTGTTCGCACCGTTTGCCGGAGGCGTCATTTCAGTCCACGCAACGAAGAAGCCTATGTGCATTGGATACGCAG
GTTCATCTTCTTTCATCAAAAAAGACATCCTGATTTGATGGGTTCTTCTGAAGTTGAGCTGTTCTTGAATTATCTCGCCA
GAGATCGACAAGTATCAGCATCTACGCAAACCATCGCCTTGAATGCTATTGTGTTTTTATATAACGATGTACTTGAAAAG
CCTTTAGGTCTTATGACAGGTTTAAAACGCGTTCAACGTCAGCATCGTGTGCCTGTCGTATTAACTGCTGATGAAGTAAA
GGCAACTTTCGAGGTGATGAGTGGAACATGTCAGCTCATGGCGCAATTACTTTATGGCGCGGGTTTAAGAGTGAGTGAAT
GCATTGGCTTGAGGGTAAAAGACATTGATTTCGGTGCAAAGACTTTGACCGTGCGTGATGGCAAGGGCGGAAAGGACAGA
ACCACCTTACTTCCATCTCAATTAATTGAGCGACTTCAAAAGCACCTTGTCATGGTTGCACAATTGCATTCTGCAGATAT
TGCAAAAGGCGGTGGTTACGCGGCAATGCCTAATGCACTTTATCGTAAATATCCTGCAGCCTCACGCTCTATCGCATGGC
AGTTTGTATTTCCTTCTAAAGTGCTACGGCCATGGCAGAATGAATTCCAATTGGCGCGCTGGCATATGTCAGATACGACG
ATACAGCGTGCATTTAAGTCCGCATTAAATCTAGCAGGGGTTAGAAAGCACGCTTCAGTTCATACCTTGCGGCATTCGTT
TGCTACGCATTTACTGAGTGCCGGTACTGACATTAGAACAATTCAATTGTTACTTGGGCATCGTAGTTTGCAAACCACCA
TGATTTATACCCATGTGATTCAAGCAACAAAAATGGTGACGAGCCCTTTTGATAGGCTTTGA

Protein sequence : 
MDRVRTVCRRRHFSPRNEEAYVHWIRRFIFFHQKRHPDLMGSSEVELFLNYLARDRQVSASTQTIALNAIVFLYNDVLEK
PLGLMTGLKRVQRQHRVPVVLTADEVKATFEVMSGTCQLMAQLLYGAGLRVSECIGLRVKDIDFGAKTLTVRDGKGGKDR
TTLLPSQLIERLQKHLVMVAQLHSADIAKGGGYAAMPNALYRKYPAASRSIAWQFVFPSKVLRPWQNEFQLARWHMSDTT
IQRAFKSALNLAGVRKHASVHTLRHSFATHLLSAGTDIRTIQLLLGHRSLQTTMIYTHVIQATKMVTSPFDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 1e-58 49
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 7e-59 49
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 7e-59 49
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 4e-59 49
int1 YP_005160012.1 integrase Not tested Not named Protein 8e-48 48
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 3e-58 48
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 3e-58 48
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 3e-58 48
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 2e-58 48
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 3e-58 48
intI1 AAK02045.1 integrase Not tested SGI1 Protein 3e-58 48
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 2e-58 48
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 3e-58 48
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 2e-58 48
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 3e-58 48
intI YP_001844881.1 integrase Not tested AbaR20 Protein 3e-58 48
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 3e-58 48
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 3e-58 48
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 3e-58 48
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 3e-58 48
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 2e-58 48
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 5e-42 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M301_1848 YP_003674799.1 integron integrase VFG1028 Protein 2e-59 49