Gene Information

Name : M301_1105 (M301_1105)
Accession : YP_003674066.1
Strain : Methylotenera versatilis 301
Genome accession: NC_014207
Putative virulence/resistance : Virulence
Product : putative Fis family two component sigma54 specific transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1234607 - 1235977 bp
Length : 1371 bp
Strand : -
Note : KEGG: mfa:Mfla_1055 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase

DNA sequence : 
ATGCAAACTCCAAACATTCTAATCGTTGACGATGACAAAGATATACTCAAGCTCATTAGCATGCGCTTGAATGCCGCTGG
CTATGCCACTGTCACGACAAACAATGGCGCTGAGGCAATGTCTGCCATCATGCTACAAAGACCTGATTTGGTGATTAGCG
ACTTACGTATGCCTGCGATGGATGGCATGGCTTTACTAGACGCCATTCAACAATCGCACCCTAGCCTACCCGTAATTATG
TTAACGGCGCATGGCTCTATACCAGATGCCGTTAATGCCACGCAGCGCGGTGTGTTCAGCTTTTTAACCAAGCCGTTTGA
TAGCCAAGCACTGCTGCAACAAGTCGCCTCTGCGCTGCGCTTGAATGGCACGCAAACTCATACAGTCTCTAATGAGGATG
ATAGCTGGCGTGCAGATATTCTAACGCGCAGTTCAATAATGGAGAGTTTGCTTGGTCAAGCCAAACTCGTTGCTAATACC
GATGCTAGCGTATTTATTCAAGGTGAAAGCGGTTCTGGAAAAGAATTGCTGGCACGTGCAATTCATCGCTACAGCCCACG
CAGCGCAAAACCTTTTGTGGCAATTAACTGTGGTGCGATCCCAGAAAATCTACTTGAATCAGAACTATTTGGTCACAGCA
AAGGCGCTTTTACTGGCGCTATCAATAACCATGTTGGACTGTTCCAAAGTGCAGAAGGCGGCACACTGTTTTTAGATGAG
ATTGGCGATATGCCTCAAGCCTTGCAAGTTAAAGTGCTACGCGCATTGCAAGAACGCGTGATACGACCTGTAGGTAGCAC
GACCAATATACCAATAGATTTACGCTTAATTTCAGCCACCCACCGCAACTTAGTTAATGAGATGAAAGAAGGTCGTTTTC
GGGAAGATTTATTTTATCGCATCAATGTCGTAAGCTTGGAAATTCCATCGTTAGCTAATCGTCGCGAAGATGTAAGCCTG
CTTGCAAATCATTTCTTGCATGTCTTTAGCGATAAATATAAGAAAAAATTACATAGTTTTGCACCAGATGCCTTAGAAAT
TTTGATTACAGCGCCTTGGCCAGGCAATGTGCGACAGTTACAAAACATCGTTGAACAAACTGTAGTGCTTGCAACTACGC
AGGTTATTCCGATTAATTTGGTACAAAAAGCTTTGCAAGAAGGTGCAAATACAGTTATCCCGCTAGATGTTGCTCGCCAA
CAATTTGAGTTTAACTATCTGATTAATATCCTTAAAACAACTCAAGGCAATGTTACTCAGGCGGCAAAACTTGCGCAACG
CAACCGCACAGAGTTTTACAGATTACTAGAACGCCACCATATTCAAGCCAGCACATTTAAAGCCTCTAAAGAAAATGAGT
CACCTGACTAG

Protein sequence : 
MQTPNILIVDDDKDILKLISMRLNAAGYATVTTNNGAEAMSAIMLQRPDLVISDLRMPAMDGMALLDAIQQSHPSLPVIM
LTAHGSIPDAVNATQRGVFSFLTKPFDSQALLQQVASALRLNGTQTHTVSNEDDSWRADILTRSSIMESLLGQAKLVANT
DASVFIQGESGSGKELLARAIHRYSPRSAKPFVAINCGAIPENLLESELFGHSKGAFTGAINNHVGLFQSAEGGTLFLDE
IGDMPQALQVKVLRALQERVIRPVGSTTNIPIDLRLISATHRNLVNEMKEGRFREDLFYRINVVSLEIPSLANRREDVSL
LANHFLHVFSDKYKKKLHSFAPDALEILITAPWPGNVRQLQNIVEQTVVLATTQVIPINLVQKALQEGANTVIPLDVARQ
QFEFNYLINILKTTQGNVTQAAKLAQRNRTEFYRLLERHHIQASTFKASKENESPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-61 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-61 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M301_1105 YP_003674066.1 putative Fis family two component sigma54 specific transcriptional regulator BAC0467 Protein 6e-85 45
M301_1105 YP_003674066.1 putative Fis family two component sigma54 specific transcriptional regulator BAC0089 Protein 2e-85 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M301_1105 YP_003674066.1 putative Fis family two component sigma54 specific transcriptional regulator VFG1214 Protein 7e-73 47
M301_1105 YP_003674066.1 putative Fis family two component sigma54 specific transcriptional regulator VFG1249 Protein 2e-66 42