Gene Information

Name : GC56T3_0846 (GC56T3_0846)
Accession : YP_003670466.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 904471 - 905403 bp
Length : 933 bp
Strand : +
Note : KEGG: gyc:GYMC61_0872 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence : 
ATGCGGAACATTGTCGTTGGCTCGCGGCGCAGCAAGCTTGCCTTGACCCAGACGAAGTGGGTGATCAACGAATTGAAACA
GCTTGGGGCGCCGTTTACGTTTGAAGTGAAAGAAATCGTCACGAAAGGAGATCGGGTGCTTGATGTTACGCTCTCGAAAG
TCGGGGGCAAAGGGTTGTTTGTGAAAGAGATTGAGCATGAATTGCTCGCCGGCGGCATCGATATGGCGGTCCATAGCATG
AAAGATATGCCGGCTGTGCTGCCCGAAGGTTTAGTGATCGGTGCGGTTCCGCGCCGCGAAGATGCACGCGATGTGCTTGT
CAGCAAAGGAAACCGGATGCTCTCCGACTTGCCGCCTGGGTCGGTCATTGGCACGAGCAGCTTGCGCCGTTCGGCGCAGC
TGCTTGCCTATCGCCCGGATTTGACGATCAAATGGATTCGCGGCAATATTGACACAAGGTTGGCGAAGCTCGAAAGCGAA
GAGTACGATGCGATCGTGCTGGCGGCGGCGGGTCTTGCGCGCATGGGTTGGGGCGATGACGTCATCAGCGACTATCTTCC
TTTTGATGTCTGTGTTCCGGCGGTCGGCCAAGGGGCGCTGGCGGTCGAATGCCGGGAGGATGATGACGAATTGCGCCAAT
GGCTCAGCCGGTTAAACGACGAGCAAACCGAGCGGGCTGTTCGGGCGGAGCGCGCCTTTTTGCAGCAAATGGAAGGCGGC
TGTCAAGTGCCGATTGCCGGCTACGCTGAAGCAGACGGCGGCATGGTGCGCCTCACGGCCCTTGTCGCTTCGCCGGATGG
AAAAGAAAAGTATAAAGAAATGGTCACGGGCGCCGATCCGGAGGCCGTCGGCCGGCAGGCGGCCGCTGTCTTGATCGAAC
AAGGGGCGAAAGCGCTCATCGAGCGGGTGAAACAGGAGTTGAGCCAATCATGA

Protein sequence : 
MRNIVVGSRRSKLALTQTKWVINELKQLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVKEIEHELLAGGIDMAVHSM
KDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPPGSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESE
EYDAIVLAAAGLARMGWGDDVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGG
CQVPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTGADPEAVGRQAAAVLIEQGAKALIERVKQELSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-57 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-57 47