Gene Information

Name : GC56T3_0073 (GC56T3_0073)
Accession : YP_003669724.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 87517 - 89001 bp
Length : 1485 bp
Strand : +
Note : KEGG: gyc:GYMC61_0075 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGAGTCATGAAGAATTGAACGACCAACTGCGCGTCCGCAGGGAAAAGCTGAAAAAAATTGAGGAATTGGGTGTCGACCC
GTTTGGCAAACGGTTCGAGCGCACTCATAAAGCGCAAGAACTGTTCGAACTGTACGGCGATTTGTCGAAAGAGGAACTTG
AAGAAAAGCAAATTGAAGTCGCCGTCGCCGGCCGCATCATGACAAAGCGCGGCAAAGGAAAAGCCGGGTTCGCCCATATC
CAGGATGTCACCGGGCAGATTCAAATTTACGTCCGTCAAGACGATGTTGGCGAACAGCAGTACGAACTGTTTAAAATCTC
TGACCTTGGCGATATCGTCGGCGTGCGCGGCACAATGTTTAAAACAAAAGTTGGTGAACTTTCCATCAAAGTGTCGTCGT
ACGAATTTTTGACGAAAGCGTTGCGTCCGCTGCCGGAAAAATACCATGGTTTGAAAGACATAGAGCAACGCTATCGCCAG
CGTTATCTCGATTTAATTATGAATCCGGAGAGCAAAAAGACGTTCATCACCCGCAGTTTAATCATCCAATCGATGCGGCG
GTATCTCGACAGCCGTGGCTATTTGGAAGTTGAAACGCCGATGATGCACGCCGTTGCTGGCGGCGCTGCGGCGCGCCCGT
TCATTACGCATCATAACGCATTGGATATGACCCTTTATATGCGAATCGCCATCGAGCTCCATTTAAAACGGCTCATCGTC
GGCGGTTTGGAAAAAGTGTATGAAATCGGCCGCGTTTTCCGGAACGAAGGCATTTCCACCCGCCATAATCCGGAGTTTAC
GATGCTCGAATTGTACGAGGCGTACGCCGATTTCCGCGACATCATGGAACTAACGGAAAACTTGATCGCCCACATTGCCA
CTGAAGTGCTTGGAACGACGAAAATTCAATACGGCGAGCATGTCGTCGACTTAACGCCCGAGTGGCGGCGCCTGCATATG
GTCGATGCGATCAAGGAATATGTCGGCGTCGACTTCTGGCGGCAGATGAGCGACGAAGAGGCGCGGGAGCTGGCGAAAGA
ACATGGAGTGGAAGTTGCTCCACATATGACGTTTGGCCATATTGTCAACGAATTTTTTGAACAAAAAGTCGAGTCTCACC
TCATTCAGCCGACGTTCATTTATGGCCATCCGGTTGAAATTTCACCGTTGGCCAAGAAAAATCCGGACGACCCGCGTTTT
ACCGACCGATTTGAGCTGTTTATCGTCGGGCGCGAACATGCCAACGCCTTTACCGAATTGAATGATCCGATCGATCAGCG
CCAACGCTTTGAGGCGCAGCTGAAAGAGCGTGAACAAGGAAACGATGAAGCACATGAAATGGACGAAGACTTCCTTGAAG
CGCTCGAGTACGGCATGCCGCCAACAGGCGGGCTTGGCATCGGCGTCGACCGTCTGGTCATGCTGCTGACGAACTCGCCG
TCGATCCGCGACGTGTTGCTTTTCCCGCAAATGCGTCATAAATAG

Protein sequence :
MSHEELNDQLRVRREKLKKIEELGVDPFGKRFERTHKAQELFELYGDLSKEELEEKQIEVAVAGRIMTKRGKGKAGFAHI
QDVTGQIQIYVRQDDVGEQQYELFKISDLGDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQ
RYLDLIMNPESKKTFITRSLIIQSMRRYLDSRGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIV
GGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMELTENLIAHIATEVLGTTKIQYGEHVVDLTPEWRRLHM
VDAIKEYVGVDFWRQMSDEEARELAKEHGVEVAPHMTFGHIVNEFFEQKVESHLIQPTFIYGHPVEISPLAKKNPDDPRF
TDRFELFIVGREHANAFTELNDPIDQRQRFEAQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSP
SIRDVLLFPQMRHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-123 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_0073 YP_003669724.1 lysyl-tRNA synthetase VFG1668 Protein 1e-123 52