Gene Information

Name : GC56T3_0763 (GC56T3_0763)
Accession : YP_003670385.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 816705 - 819335 bp
Length : 2631 bp
Strand : +
Note : TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: gyc:GYMC61_0787 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein cla

DNA sequence :
TTGAAAAAAAAGCTTGTTTTAATCGACGGCAGCAGCGTGGCGTACCGCGCCTTTTTTGCCTTGCCGCTTTTGCATAACGA
CAAAGGCATCCATACGAACGCCGTCTACGGGTTTACGATGATGTTGAATAAAATTTTGGCGGAAGAAGAGCCAACTCATA
TGCTTGTCGCGTTTGACGCCGGGAAAACGACGTTCCGGCATGAAGCGTTTCAAGAGTATAAAGGTGGGCGCCAGCAGACG
CCACCGGAGCTGTCGGAGCAGTTTCCGCTGTTGCGCGAGCTGCTGAGGGCGTATCGCATCCCCGCCTATGAACTCGAGAA
CTACGAAGCGGACGATATTATCGGAACGCTTGCCGCCCGCGCTGAGCAGGAAGGGTTTGAGGTGAAAGTCATTTCCGGCG
ACCGCGATCTGACCCAGCTCGCCTCCCCCCATGTGACGGTGGACATTACGAAAAAAGGGATTACCGATATCGAACCATAC
ACGCCGGAGACGGTCCGCGAAAAATACGGCTTAACTCCGGAACAAATCGTTGATTTGAAAGGATTGATGGGCGACAAATC
GGACAACATCCCCGGAGTGCCGGGCATCGGGGAAAAGACGGCGGTCAAGCTGCTCAGGCAATTCGGCACGGTCGAAAACG
TGCTTGCCTCCATTGACGAGATCAAAGGCGAAAAGTTGAAAGAAACGCTGCGCCAACACCGGGAGATGGCGCTGTTAAGC
AAAAAGCTCGCCGCCATTCGCCGCGACGCCCCGGTCGAGCTCTCGCTTGATGACATCGCCTATCAAGGGGAAGACCGGGA
GAAAGTGGTCGCTTTATTTAAAGAGCTTGGGTTTCAATCGTTTTTAGAGAAAATGGAATCGCCGTCATCAGAAGAGGAAA
AACCGCTTGCCAAGATGGCATTTACGCTTGCTGACCGCGTGACGGAGGAGATGCTTGCCGACAAGGCGGCGCTTGTCGTT
GAAGTGGTCGAGGAAAATTATCATGATGCGCCGATCGTCGGCATCGCTGTGGTCAACGAACATGGACGGTTTTTCCTGCG
CCCGGAGACGGCGCTTGCCGATCCGCAGTTTGTCGCCTGGCTTGGTGATGAAACGAAGAAAAAAAGCATGTTTGACTCAA
AGCGCGCGGCAGTCGCCTTGAAATGGAAAGGAATTGAGCTATGCGGCGTTTCCTTTGATTTATTGCTGGCCGCCTATTTG
CTTGATCCGGCGCAAGGTGTTGATGATGTAGCTGCCGCAGCAAAAATGAAGCAATACGAAGCGGTGCGCCCGGATGAAGC
GGTGTATGGCAAAGGGGCGAAGCGGGCCGTGCCGGATGAGCCAGTGCTCGCCGAGCATCTCGTCCGCAAGGCGGCGGCGA
TTTGGGCGCTCGAACGGCCGTTTTTGGATGAGCTGCGCCGCAACGAACAAGATCGGTTGCTCGTCGAGCTCGAGCAGCCG
TTGTCTTCGATTTTGGCGGAAATGGAATTTGCCGGAGTGAAAGTGGATACGAAGCGGCTCGAACAGATGGGCGAAGAGCT
CGCCGAGCAGCTGCGCACGGTCGAGCAGCGCATTTATGAGCTCGCCGGCCAAGAATTCAACATCAATTCACCGAAACAGC
TCGGCGTCATTTTATTTGAAAAACTGCAGCTGCCCGTCTTGAAAAAAACGAAAACCGGCTACTCCACTTCGGCGGATGTG
CTTGAAAAACTTGCGCCTTATCACGAGATCGTGGAAAACATTTTGCATTACCGCCAGCTTGGCAAGTTGCAGTCGACGTA
TATTGAAGGATTGCTGAAAGTCGTGCGACCCGATACAAAGAAGGTGCATACGATTTTCAATCAGGCGTTGACGCAAACCG
GACGGCTCAGCTCGACGGAGCCGAACTTGCAAAACATTCCGATTCGGCTTGAGGAAGGACGGAAAATCCGCCAAGCGTTC
GTGCCGTCGGAGTCTGATTGGCTCATTTTCGCCGCCGACTACTCACAAATTGAGTTGCGCGTCCTCGCCCATATTGCGGA
AGATGACAATTTAATGGAAGCGTTCCGCCGCGATTTGGATATCCATACGAAAACAGCGATGGACATTTTCCAAGTGAGCG
AGGACGAAGTGACGCCCAACATGCGCCGTCAGGCGAAGGCGGTCAACTTTGGGATCGTTTACGGGATCAGTGATTACGGC
TTGGCGCAAAACTTAAATATTTCGCGCAAAGAGGCGGCTGAATTCATCGAGCGCTACTTCGAAAGCTTCCCTGGCGTGAA
GCGGTATATGGAAAACATTGTGCAAGAAGCAAAACAGAAAGGGTATGTGACGACGCTGCTGCATCGGCGCCGCTATTTGC
CGGATATCACGAGCCGCAACTTCAACGTCCGCAGTTTTGCTGAACGGATGGCGATGAACACGCCGATTCAAGGGAGCGCC
GCTGACATTATTAAAAAGGCGATGATCGATCTGAACGCCAGACTGAAGGAAGAGCGGCTGCAAGCGCGCCTTTTGCTGCA
GGTGCATGACGAGCTCATTTTGGAGGCGCCGAAAGAAGAGATGGAGCGGCTGTGCCGGCTCGTTCCGGAAGTGATGGAGC
AAGCGGTCACACTTCGCGTGCCGCTCAAAGTCGATTACCATTATGGCTCGACGTGGTATGACGCGAAATAA

Protein sequence :
MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDAGKTTFRHEAFQEYKGGRQQT
PPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPY
TPETVREKYGLTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMALLS
KKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKPLAKMAFTLADRVTEEMLADKAALVV
EVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYL
LDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELRRNEQDRLLVELEQP
LSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADV
LEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAF
VPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYG
LAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSA
ADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 51