Gene Information

Name : GC56T3_0720 (GC56T3_0720)
Accession : YP_003670343.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 770261 - 771751 bp
Length : 1491 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_0744 betaine-aldehyde dehydrogenase

DNA sequence :
ATGATTTCTATGAAAACAACAGAAGCTGGTTTATGGATTGGCGGCGAATGGAGGCCGGCGGCGGATGGCGCGATGTTTGA
CGTCATCGACCCGGCGACAGGCCAAGTGACGGCCCGTGTGGCCAACGCCGGGGAAAAAGATGTCGACGCGGCGGTCGCCA
TCGCCGAAGAGGCGTTTTCGGACCGGCGTTGGCTGTCGATTCCGCCGCTCGAGCGCGGGCGCATCTTGCGGCGCATCGCC
GAACTGATCCGCCAGCATCATTACGAGCTGGCGCAGCTCATGACGCGGGAAAACGGCATGCCGATCAATCTAGCGTTGTT
TATTGAAATTCCGCTTGCCGCCGACTGCTTCGACTTTTTCGCCTCGCTCGTCGTCAAGCCGCAAGGGGAGGTGCTGCCGT
TTTCCGTCGCCGGCTCGGCGCCGGATTATATGGCGTGGACGATGAAGGAGCCGATCGGGGTGGCTGGGCTCATCACCCCG
TGGAACTTTCCGCTTTTGATGCCGACGTGGAAAATCGCCCCAGCGCTGGCGGCGGGCTGTACGATGGTGTTAAAACCGGC
GCCGGAAACGCCGCTGACGGCGTTGAAGCTTGCTGAGATTTGCCATGAGGCCGGCGTGCCGGAAGGCGTCGTCAACGTCC
TGCCTGGACTCGATGAGGCCGGAAAAGCGCTCGTCAGCCACCCTGGCGTGCCGAAAATCGCGTTTACCGGCGAGACGGAA
ACCGGGCGCCACATCTTGCAAGCGGCCGCTCCCCACATTAAGCGGGTGACGCTCGAGCTTGGCGGGAAGTCGCCGAATAT
CATCTTTGCGGACGCGGATCTTGAACAGGCGGCGAAAAGCGCGCTGTTTGGCGTGTTCTACAATTCAGGGCAAGTGTGCC
AAGCGGGAAGCCGCATTTTAGTCGAACGGCCGGTTTACGAAACGTTTGTCGAGCTGTTGGCCAGCAAAGCGAAAAAGCTG
AAAGTCGGGCCCGGCACGGATGCGCGCAGCGACCTTGGCCCCGTCATCAGCCGGGAGCAATACGAGAAAGTATTGCGCTA
CATTGACATCGGCAAGCAGGAAGGGGCGAAGCTCGTTGCGGGAGGGAGCGCTTTAGATGGGCTTGGCGGCGGCTATTTCA
TTGAACCGACCGTCTTTGCCGATGTATCGCCATCGATGTGCATCGCCCGTGAAGAAATTTTCGGGCCGGTCGCCGCTGTC
ATTCCGTTTCAAGATGAAGAGGAAGCCGCCTCCATTGCCAACGATACGATTTACGGCTTGGCGGCGGCGGTTTGGACGAA
TGACATCAAACGGGCGCTCCGCTTAGCGCGGCGGGTGAAAAGCGGAACCGTGTGGATCAACACGTACCAAGTGCTGTCGC
CGACTGCGCCGTTTGGCGGTTATAAGCAGAGCGGCCTCGGCCGCGAGCTCGGGATGCAGGCGCTTGAAGCGTATTTAGAA
ACGAAAACGGTCATTTGCGATATGAACGACCGGCCGATGACATTGTTTTAA

Protein sequence :
MISMKTTEAGLWIGGEWRPAADGAMFDVIDPATGQVTARVANAGEKDVDAAVAIAEEAFSDRRWLSIPPLERGRILRRIA
ELIRQHHYELAQLMTRENGMPINLALFIEIPLAADCFDFFASLVVKPQGEVLPFSVAGSAPDYMAWTMKEPIGVAGLITP
WNFPLLMPTWKIAPALAAGCTMVLKPAPETPLTALKLAEICHEAGVPEGVVNVLPGLDEAGKALVSHPGVPKIAFTGETE
TGRHILQAAAPHIKRVTLELGGKSPNIIFADADLEQAAKSALFGVFYNSGQVCQAGSRILVERPVYETFVELLASKAKKL
KVGPGTDARSDLGPVISREQYEKVLRYIDIGKQEGAKLVAGGSALDGLGGGYFIEPTVFADVSPSMCIAREEIFGPVAAV
IPFQDEEEAASIANDTIYGLAAAVWTNDIKRALRLARRVKSGTVWINTYQVLSPTAPFGGYKQSGLGRELGMQALEAYLE
TKTVICDMNDRPMTLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-81 45
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-72 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-81 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-82 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-84 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-84 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-84 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-84 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_0720 YP_003670343.1 aldehyde dehydrogenase VFG0082 Protein 4e-82 43