Gene Information

Name : GC56T3_0423 (GC56T3_0423)
Accession : YP_003670056.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 449015 - 450703 bp
Length : 1689 bp
Strand : +
Note : KEGG: gka:GK0370 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGGAAAACATCCGCTCGTTTATGTCGTTTCCGGAAAGCCGCAAAGTGTACATCGAAGGGTCGCGCCCGGATGTGCGCGT
GCCGATGAGAGAAATTGCTTTGTCGCCAACGAAAACGCCGCAAGGAATGGTGGAAAACAAACCGGTGCGTGTCTACGATA
CGACGGGCCCGTATACGGATCCCGATTTTGAACCGGACGTGGAGAAAGGCTTGCCTCCTCTTCGCCGTCGCTGGATTGTC
GAGCGCGGCGATGTGGAGGAAATGGAGCGGTCTTCTGTTGCGATCCAACGTTCGCTTCCGTTTGTGCGCCGTCCATTGAG
GGCAAAGCCCGGAAAAACAGTGACACAAATGCATTACGCCAAACGGGGGATCATTACGCCAGAAATGGAGTTTGTCGCGA
TTCGTGAACAAATCAATCCGGAAATTGTCCGCCAAGAAGTCGCCGCTGGTCGGGCCATTATTCCAGCCAATATTAACCAT
CCGGAGAGCGAACCGATGATCATCGGCCGTCGTTTCCATGTGAAAATTAATGCCAATATCGGCAACTCGGCTGTTTCTTC
ATCGATTGAAGACGAAGTGGAAAAATTGCTTTGGGCGGTGCGTTGGGGCGCCGATACGGTCATGGATTTATCGACCGGCA
AACACATTCATGAAACGCGCGAGTACATCATCCGCAATTCGCCGGTCCCCGTGGGAACGGTGCCGATTTATCAGGCGCTC
GAAAAGGTAGGAGGGGTGCCGGAGAAGCTGACATGGGACGTGTACCGCGAGACGCTCATCGAGCAGGCTGAACAAGGAGT
CGACTACATGACGATCCACGCCGGTGTGCGGCTTCATTACATTCCGCTCACCGCCAACCGGACGACCGGAATTGTCTCGC
GCGGCGGCTCGATCATCGCCCAATGGTGTTTGGCCCACCATGAAGAAAACTTTTTGTATACGCATTTTGAAGAAATCTGC
GAGATTTTGAAACAATACGATGTCGCGATCTCCCTTGGCGACGGCTTGCGCCCCGGCTCCATCGCCGATGCGAACGATGA
GGCGCAGTTTGCGGAACTCAAGACGCTCGGCGAGCTGACGAAAATCGCCTGGAAGCATGATGTGCAGGTGATGATCGAAG
GGCCCGGACATATTCCAATGCATAAAATTCGCGAAAATGTCGAGCAGGAACAGGAAATTTGTCATGAAGCGCCGTTTTAT
ACGTTAGGGCCGCTTGTCACCGACATCGCGCCCGGGTATGACCATATTACGTCAGCGATTGGCGCCGCCATCATTGGTGC
TTATGGAACGGCGATGCTTTGTTACGTAACGCCCAAAGAACATTTAGGGTTGCCGAATAAAGAGGACGTACGCGCCGGGG
TCGTGGCCTATAAAATCGCCGCCCATGCGGCTGATCTGGCAAAAGGGCATCCAGCCGCTCAGCAGCGTGACGACGCGCTC
TCGAAAGCGCGCTTTGAATTTCGTTGGAACGATCAGTTCAATTTATCCCTCGATCCGGAACGGGCCCGCGAATACCATGA
TGAAACATTGCCGGCTGAGGCGGCGAAAACGGCTCATTTTTGTTCGATGTGCGGGCCGAAATTTTGTTCCATGAACATTT
CACATGAACTGCAACGGAAAATCAAAGAGGAGGGGATGAAAGAAAAAGCGCAACAATTTATTCGGCAAGGGTCGTCGCTG
TATCAATGA

Protein sequence :
MENIRSFMSFPESRKVYIEGSRPDVRVPMREIALSPTKTPQGMVENKPVRVYDTTGPYTDPDFEPDVEKGLPPLRRRWIV
ERGDVEEMERSSVAIQRSLPFVRRPLRAKPGKTVTQMHYAKRGIITPEMEFVAIREQINPEIVRQEVAAGRAIIPANINH
PESEPMIIGRRFHVKINANIGNSAVSSSIEDEVEKLLWAVRWGADTVMDLSTGKHIHETREYIIRNSPVPVGTVPIYQAL
EKVGGVPEKLTWDVYRETLIEQAEQGVDYMTIHAGVRLHYIPLTANRTTGIVSRGGSIIAQWCLAHHEENFLYTHFEEIC
EILKQYDVAISLGDGLRPGSIADANDEAQFAELKTLGELTKIAWKHDVQVMIEGPGHIPMHKIRENVEQEQEICHEAPFY
TLGPLVTDIAPGYDHITSAIGAAIIGAYGTAMLCYVTPKEHLGLPNKEDVRAGVVAYKIAAHAADLAKGHPAAQQRDDAL
SKARFEFRWNDQFNLSLDPERAREYHDETLPAEAAKTAHFCSMCGPKFCSMNISHELQRKIKEEGMKEKAQQFIRQGSSL
YQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 68
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 68
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66