Gene Information

Name : GC56T3_0355 (GC56T3_0355)
Accession : YP_003669992.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 366763 - 367446 bp
Length : 684 bp
Strand : -
Note : KEGG: bld:BLi01650 YknY; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGATTGAACTTAAAAATATTGAAAAAAGCTACTATTTAGGAGATGAACCTATACCTATTTTAAAAAAAATAAACCTCAA
AATAAGTAAAGGGGAATTTGTTTCTATTATGGGACCTTCGGGTTCTGGAAAATCAACTTTAATGAATATTATTGGTTGTT
TGGATAAACCTACTTCTGGTGATTATATTTTCGAAGGTCAAAATGTAACTAATTTTACTGACAAAGAATTAGCAAGAATC
AGGAATAGGCGTATAGGATTTGTTTTTCAACAATTTCACTTATTACCTCGCTTGACAGCATTAAAAAACGTTGAACTCCC
AATGATCTATTCAGGACATAAATCATCAACATTTAGAGAGGAATGTGCAAAAAATGAATTGAAACGAATGAATTTGGAAG
AAAGAATGTTCCACCTTCCTAATGAACTATCTGGTGGTCAGAAACAACGTGTGGCTATTGCTCGTGCGCTGATAAACAAA
CCTTCATTGCTACTAGCTGATGAACCAACGGGTGCATTAGATACCTCAACAAGTTATGAAATAATGGATATATTTAAACA
ATTAAATAAAGAAGGAACAACAATAATCATTGTGACACATGATGAAGATATCGCAAATTTTGCAGACAGAAAAATAATAT
TAAAAGATGGACATATTATAAGTGATACTAAGGTAGGGAAATGA

Protein sequence : 
MIELKNIEKSYYLGDEPIPILKKINLKISKGEFVSIMGPSGSGKSTLMNIIGCLDKPTSGDYIFEGQNVTNFTDKELARI
RNRRIGFVFQQFHLLPRLTALKNVELPMIYSGHKSSTFREECAKNELKRMNLEERMFHLPNELSGGQKQRVAIARALINK
PSLLLADEPTGALDTSTSYEIMDIFKQLNKEGTTIIIVTHDEDIANFADRKIILKDGHIISDTKVGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-30 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_0355 YP_003669992.1 ABC transporter NC_012469.1.7686878. Protein 2e-57 61
GC56T3_0355 YP_003669992.1 ABC transporter NC_008702.1.4606598. Protein 2e-44 50
GC56T3_0355 YP_003669992.1 ABC transporter CP001581.1.gene798.p Protein 4e-36 46
GC56T3_0355 YP_003669992.1 ABC transporter CP001581.1.gene598.p Protein 3e-36 45