Gene Information

Name : GC56T3_0348 (GC56T3_0348)
Accession : YP_003669986.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 358829 - 359521 bp
Length : 693 bp
Strand : -
Note : KEGG: gyc:GYMC61_1171 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGGAAGAGTATATGTTAGAAACCCGTCATATAAGCAAAGCGTTTGGGAAACAACTCGCGGTGGATGATGTATCCATAAA
AGTCAAGAAACATACCATTTATGGATTGCTCGGGCCAAATGGAGCGGGAAAATCCACTCTTTTAAAAATGCTGACAGGGC
TGTTGCGTCCCACAAAAGGGGAAATCGTCATCAACGGCCATCCTTGGAGCAGAAAAGTCCTGAAAGATATCGGCGCACTG
ATCGAATCCCCGGCTCTTTACGGCAATTTAACAGCCTATGAGAATTTACTCGTTCACGCCAAATTGCTTCATTTGCCCGA
CTCGCGAATCCAAGAAGTTTTGAACATCGTCGGCTTAGAAAATACGGGGAAAAAGAAAGCATCTCAATTTTCCCTTGGCA
TGAAGCAAAGGCTAGGAATTGCCAAAGCTCTTTTAAACCATCCAAAACTGCTCATTCTCGACGAACCGACAAATGGCTTG
GACCCATTAGGCATCCAGGACTTGCGAACACTCATTAAATCGTTTGCCGAAAACGGGATCACCGTCATCCTATCGAGCCA
TATTTTGTCCGAAGTCAAACAATTAGCCGATTACATTGGCATTATTCAAAACGGAAAACTCAGGTACGAGGGGAAAATAG
ACGAGAGTCAAGATCTCGAAAAACTCTTCATCGATGTTGTGAACAAGCAATGA

Protein sequence :
MEEYMLETRHISKAFGKQLAVDDVSIKVKKHTIYGLLGPNGAGKSTLLKMLTGLLRPTKGEIVINGHPWSRKVLKDIGAL
IESPALYGNLTAYENLLVHAKLLHLPDSRIQEVLNIVGLENTGKKKASQFSLGMKQRLGIAKALLNHPKLLILDEPTNGL
DPLGIQDLRTLIKSFAENGITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQDLEKLFIDVVNKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 6e-50 54
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-43 50
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-42 48
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-42 48
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 4e-40 47
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 4e-40 47
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 4e-40 47
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-40 47
glrA YP_004287007.1 spermidine/putrescine import ATP-binding protein potA Not tested Not named Protein 4e-26 43