Gene Information

Name : GC56T3_3314 (GC56T3_3314)
Accession : YP_003672804.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 3490489 - 3491187 bp
Length : 699 bp
Strand : -
Note : KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family

DNA sequence : 
TTGGCTCGTAAACCAGCAGCATCGATCCGCAAAGCGGAGCGGAGACTGATCACGGTCGACAACCCAAAATCGCCCATCGC
GGAGCAATACCGAACGATCCGAACGAATATCCAATTTTCATTCATTGATGCGCCGCTCCGCTCCCTAATTGTCACGTCAA
CCGGACCTGGCGAAGGGAAATCGACCACCGCGGCGAACTTAGCGGTCGTCTTCGCCCAGCAAGGGAAAAAGACATTGCTC
ATTGATGCCGACTTGCGCAAACCGACCGTCCATTACACGTTCCGCTTAAACAACTACAAAGGACTGACCAACGTCTTAAC
GGGTTCGGCGCCGCTGTTGTCGACGTGCCAAGCGACCGAAATCGACCACTTATCCATCTTAACGTCCGGCCCGATTCCGC
CAAACCCGGCCGAGCTCCTCAGCTCGAACGCGATGGCGCAATGCCTCGAACAGCTGTATGAGACGTTTGACCTTGTCATC
TTCGACACCCCGCCCGTCCTCGCCGTGACGGACGCACAAATTTTAGCCAACCAATGCGACGGCACGGTGCTGGTCATCGC
AAGCGGCGGCACCGAAATCGAAGCGGCGGTCAAGGCGAAAGAACTGCTCGAAGCGGCCAACGCCAAACTGCTCGGCGTTG
TCTTGAACAAGCGGAAGCACCGTGACGGCGGGTACTATTACTACTATCAATACAAGTAA

Protein sequence : 
MARKPAASIRKAERRLITVDNPKSPIAEQYRTIRTNIQFSFIDAPLRSLIVTSTGPGEGKSTTAANLAVVFAQQGKKTLL
IDADLRKPTVHYTFRLNNYKGLTNVLTGSAPLLSTCQATEIDHLSILTSGPIPPNPAELLSSNAMAQCLEQLYETFDLVI
FDTPPVLAVTDAQILANQCDGTVLVIASGGTEIEAAVKAKELLEAANAKLLGVVLNKRKHRDGGYYYYYQYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-35 45
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 2e-22 45
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_3314 YP_003672804.1 capsular exopolysaccharide family VFG1298 Protein 1e-34 45
GC56T3_3314 YP_003672804.1 capsular exopolysaccharide family VFG1349 Protein 3e-22 44