Gene Information

Name : GC56T3_3298 (GC56T3_3298)
Accession : YP_003672789.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 3473428 - 3474756 bp
Length : 1329 bp
Strand : -
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: afl:Aflv_2667 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
GTGAAAAAAATCGCTGTCGTGGGAACTGGATATGTAGGACTCGTCACTGGCGTTTGCCTTTCCGATATCGGCCATTATGT
GACATGCGTCGATATTGACGAGCGAAAAGTGGAAAAGATGAAACAAGGGATTTCCCCGATTTACGAGCCTGGGTTGGACG
AGTTGATGAAACGAAACATCGACCGAGGCCGCCTGCATTTTACGACCAGCCATGAAGAAGCGTTCCGTGATGCCGAGGTG
ATTTACATTGCCGTCGGCACGCCGCAGAAGGAGGACGGTTCGGCAGATTTGCGGTTTGTCGAGCAAGCGGCTAGGGACAT
TGCGGTGCATATCGAACGAGATGGAGTGGTGGTTGTCACGAAAAGCACCGTTCCGGTCGGGACGAATGAAAAAATCCGAG
CGTGGATTCAGCAGCACCTTCGACGTCCTATCCGCTTTGATGTCGTATCCAACCCCGAGTTTTTGCGAGAGGGTTCGGCG
ATTTACGATACGTTCCATGGGGATCGTATCGTGATCGGGGCGGACAATGAGCGGGCGGCGGCGGTGATGGAGGAAGTGAA
CAAGCCGTTTGGCATTCCGATTTTTCATACGGACATTCATAGTGCGGAAATGATCAAATATGCTTCCAACGCCTTTTTAG
CCACCAAAATCAGCTTTATCAATGAGATCGCAAATATTTGCGAAAAAGTCGGCGCCAATGTCGAGGATGTCGCATACGGC
ATGGGGCTTGATACGCGGATCGGTCCTCAGTTCTTGCGGGCGGGAATTGGCTATGGCGGTTCGTGTTTTCCAAAAGACAC
AAAAGCGCTAGTGCAAATTGCGGGGGATGTTGATCATCAATTTGAATTGTTAGAAGCGGTCATTAAGGTGAACAACAAGC
AACAGCTTAAGCTGGTGGAAAAGGCGCGCAGCCGCTTCGGAAGTTTGCAGGGGAAAAAAGTGGCGCTGCTTGGGTTGGCA
TTTAAGCCGAATACCGATGATATGCGCGAGGCGGCTTCGATTGTCATTGCGCGAGAGCTATTGCGGGAAGGCGCCTCCGT
TGCAGCGTATGATCCGGTGGCGATGGAAAACGCCAAACGGATCATCGGCGATGAGGTGGTGTATGCTTCGTCGGTTGAAG
AGGCATTAACCGGCGCCGACTTGGCCATGATCATAACGGAGTGGGAGGAGATTAAGCAGCTTCCGCTTGAGTTGTACGCC
AAATGCATGAAAACACCGATTGTGTTTGATGGGCGCAATTGTTATCTGTTGGAAGAAGTGAAAAAGCATTCGATTGAATA
TCATTCGATTGGTAGAGAAAGTGTTCTGACGAATATGGTGAGCATCTAG

Protein sequence :
MKKIAVVGTGYVGLVTGVCLSDIGHYVTCVDIDERKVEKMKQGISPIYEPGLDELMKRNIDRGRLHFTTSHEEAFRDAEV
IYIAVGTPQKEDGSADLRFVEQAARDIAVHIERDGVVVVTKSTVPVGTNEKIRAWIQQHLRRPIRFDVVSNPEFLREGSA
IYDTFHGDRIVIGADNERAAAVMEEVNKPFGIPIFHTDIHSAEMIKYASNAFLATKISFINEIANICEKVGANVEDVAYG
MGLDTRIGPQFLRAGIGYGGSCFPKDTKALVQIAGDVDHQFELLEAVIKVNNKQQLKLVEKARSRFGSLQGKKVALLGLA
FKPNTDDMREAASIVIARELLREGASVAAYDPVAMENAKRIIGDEVVYASSVEEALTGADLAMIITEWEEIKQLPLELYA
KCMKTPIVFDGRNCYLLEEVKKHSIEYHSIGRESVLTNMVSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-46 41
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-46 41
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-46 41