Gene Information

Name : GC56T3_3211 (GC56T3_3211)
Accession : YP_003672713.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3381746 - 3383266 bp
Length : 1521 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_3296 aldehyde dehydrogenase (NAD(+))

DNA sequence : 
ATGATCTACGCACAACCAGGCCAGCCAGGCGCGCTTGTCACATTTAAAAAGCGCTACGAAAACTTCATTGGCGGCAAATG
GGTGCCGCCGGTCGACGGCGAGTATTTCGAAAATATCACGCCAATCACCGGACAGCCGTATTGCGAAGTGCCGCGCTCAA
AAGCGGCGGACATCGAACTGGCGCTTGACGCCGCCCATGCAGCAAAAGACGCATGGGGACGCACGTCTCCAGCGGAGCGC
GCCCGTTTGCTGAACAAAATCGCCGATCGGATGGAAGAAAACTTGGAAATGCTGGCCGTCGCCGAAACGTGGGAAAACGG
CAAGCCGATCCGCGAGACGCTCGCGGCTGACATTCCGCTCGCCATCGACCATTTCCGCTATTTCGCCAGCTGCATCCGCG
CGCAAGAAGGCACCATTTCGGAAATCGATCATGACACGGTCGCCTATCATTTCAAAGAACCGCTCGGCGTCGTCGGACAA
ATCATCCCGTGGAACTTCCCGATTTTAATGGCGGCCTGGAAACTCGCGCCAGCGCTCGCGGCCGGCAACTGCGTCGTGTT
GAAACCGGCGGAGCAAACGCCGACGTCGATCCTCGTTCTCATCAAACTCATCGAAGATTTGCTTCCGCCTGGCGTCGTCA
ACATCGTCAACGGCTTTGGCTTAGAAGCCGGCAAGCCGCTCGCCTCGAATCCACGCGTGGCGAAAGTGGCGTTCACCGGT
GAAACGACGACCGGACGGCTCATCATGCAGTACGCCTCGCAAAACATCGTGCCGGTCACGCTTGAGCTTGGCGGCAAGTC
CCCGAACATTTTCTTCGCTGATGTGATGGACAAAGATGACGAGTTTCTCGATAAAGCCCTCGAAGGGTTTACGATGTTCG
CTCTAAACCAAGGCGAAGTGTGCACATGCCCGTCGCGCGCCCTCATCCACGAGTCGATTTACGATGCCTTTATGGAACGG
GCGCTTGAACGCGTCAAGCAAATCAAGCAAGGCAATCCGCTCGATACGGAAACAATGATCGGCGCCCAAGCCTCGTCCGA
GCAACTCGAGAAAATTTTGTCATACATCGACATCGGCAAACAGGAAGGCGCCGAACTTTTGATCGGCGGCGAACGGAACA
TGCTGGAAGGGGAACTCGCAGGCGGCTATTACGTCAAGCCGACGATTTTCAAAGGACATAACAAAATGCGCATCTTCCAA
GAAGAAATTTTCGGCCCGGTGCTCGCGGTCACGACGTTTAAAGATCACGACGAAGCGCTTTCGATCGCCAATGAGACGCT
GTACGGCCTTGGCGCCGGCGTCTGGACGCGCGACATCAACACCGCGTACCGCTTCGGCCGCGGCATCCAAGCCGGCCGCG
TTTGGACGAACTGCTATCACGTCTATCCGGCCCATGCGGCATTTGGCGGCTACAAGATGTCCGGCATCGGCCGCGAAACG
CACAAAATGATGCTTGAGCATTACCAACAAACGAAAAACTTGCTCGTCAGCTATTCGCCGAAAAAACTTGGCTTGTTCTG
A

Protein sequence : 
MIYAQPGQPGALVTFKKRYENFIGGKWVPPVDGEYFENITPITGQPYCEVPRSKAADIELALDAAHAAKDAWGRTSPAER
ARLLNKIADRMEENLEMLAVAETWENGKPIRETLAADIPLAIDHFRYFASCIRAQEGTISEIDHDTVAYHFKEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPTSILVLIKLIEDLLPPGVVNIVNGFGLEAGKPLASNPRVAKVAFTG
ETTTGRLIMQYASQNIVPVTLELGGKSPNIFFADVMDKDDEFLDKALEGFTMFALNQGEVCTCPSRALIHESIYDAFMER
ALERVKQIKQGNPLDTETMIGAQASSEQLEKILSYIDIGKQEGAELLIGGERNMLEGELAGGYYVKPTIFKGHNKMRIFQ
EEIFGPVLAVTTFKDHDEALSIANETLYGLGAGVWTRDINTAYRFGRGIQAGRVWTNCYHVYPAHAAFGGYKMSGIGRET
HKMMLEHYQQTKNLLVSYSPKKLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-143 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-151 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_3211 YP_003672713.1 aldehyde dehydrogenase VFG0082 Protein 4e-144 65