Gene Information

Name : GC56T3_0252 (GC56T3_0252)
Accession : YP_003669897.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 269219 - 269716 bp
Length : 498 bp
Strand : +
Note : KEGG: gtn:GTNG_2847 single-strand DNA binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGATTAACCGCGTCATTTTGACAGGACGACTGACGGACGATCCGCAGTTTCGATATACGCCAAGCGGAGTGGCTGTTGT
CACATTCATACTGGCCGTTACCCGTCCGTTTGCGAATCAAAACGGGGTGCGGGAAGCTGATTTTATTCGTTGCGTCGCAT
GGCGAAAACAGGCGGAGAACATCGCAAACTACTTGAAGAAAGGAAGTATGGTCGGGATCGACGGGCGATTGGAAACGGGC
AGCTATGAACGGAACGGACGGAGGACGTATTATACACAGGTCGTGGTGGATACGGCAACATTTCTGGAGCCGCGCAACGC
TTCGAATTCGGGCGAGAAGCAGAAAGGGAATAGGGAGACATCCAAACAAGAGAAAAACGCCTCTAGGAGGGCGAGAGAAG
CGTTTATGAAGCCACAAGATGGACAGGGATGGTTTAATGATCCTTTTGCTGATAACGGGGAGCCGATCGAAATGAACGAT
GACGATTTGCCGTTTTGA

Protein sequence :
MINRVILTGRLTDDPQFRYTPSGVAVVTFILAVTRPFANQNGVREADFIRCVAWRKQAENIANYLKKGSMVGIDGRLETG
SYERNGRRTYYTQVVVDTATFLEPRNASNSGEKQKGNRETSKQEKNASRRAREAFMKPQDGQGWFNDPFADNGEPIEMND
DDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 46
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 8e-32 46
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-30 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 45
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 45
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-31 44
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-28 43
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-28 43