Gene Information

Name : GC56T3_2813 (GC56T3_2813)
Accession : YP_003672334.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2949381 - 2950898 bp
Length : 1518 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: gka:GK0730 aldehyde dehydrogenase

DNA sequence : 
ATGATTTACAGCAAACCAGGCGAAAGAGACGCAAAAGTTCAATTCAAAGCAAGATACGATAACTATATTAACGGAGAATG
GGTGCCGCCTATTTCAGGCCAATATTTCAAAAATATCACGCCCATAACAGGAGAAGTATTTTGTGAAGCAGCACGCTCGC
AGGCTGAGGATATTGAATTGGCATTAGATGCCGCGCACGCGGCAAAAGAAGCTTGGGGAAAAACATCCCCGGCTGACAGA
GCGTTGATTTTAAATAAAATCGCTGATCGCATGGAAGAAAACTTGGAAATGTTAGCGGTTGCCGAAACATGGGATAACGG
CAAACCGATCCGTGAAACGTTAAACGCCGACCTACCCCTAGCCATCGATCATTTTCGTTATTTCGCTGGAGCCATACGCT
CCCAAGAAGGAACAATCAGCCAAATTGATGACGATACGATCGCGTACCATTTTTATGAACCACTCGGCGTTGTCGGGCAA
ATTATCCCATGGAATTTTCCATTATTGATGGCAGCATGGAAAATTGCTCCTGCGCTTGCTGCCGGAAACTGCATTGTGCT
AAAACCAGCTGAACAAACTCCGGCATCGATTATGGTGCTTATGGAGCTGATTGGCGATCTGTTGCCTCCTGGAGTGCTCA
ACGTTGTCAATGGGTTCGGATTAGAAGCTGGCAAACCATTAGCTTCTAGTTCACGTATCGCCAAAATCGCGTTTACCGGT
GAAACAACGACAGGGCGGCTGATTATGCAATACGCTTCACAAAATATTATTCCTGTTACACTGGAATTGGGAGGCAAATC
CCCAAACATCTTCTTTCCTGATGTAATGGAAAAAGACGATGACTTTTTAGATAAAGCGATTGAAGGATTTGTCATGTTCG
CTTTAAACCAAGGCGAGGTTTGTACGTGCCCTTCTCGTGCTCTCATCCATGAGTCCATTTATGACGAATTTATGGAGCGC
GCTCTTGAACGCGTGAAAAAGATTCGAACAGGAAATCCGCTTGATACAAGCACAATGATGGGAGCACAAGCTTCAGCAGA
ACAAATGGAAAAAATTCTTGCATACATTGATATTGGAAAACAAGAGGGCGCCGAATGCCTAATCGGCGGCGAAAAAAACA
TAATCCCTGGATTCGAAAACGGGTATTATATCAAGCCAACCGTATTTAAAGGACATAATAAAATGCGCATTTTCCAAGAA
GAAATTTTCGGTCCAGTAGTCTCAGTAACAACGTTTAAAGATGAACAGGAGGCTTTGGAGATTGCTAATGATACGTTGTA
CGGCCTTGGTGCCGGGGTATGGACGAGAAACATCAACTTGGCTTATCGTTTCGGAAGAGGCATTCAGGCAGGAAGAGTTT
GGACAAATTGCTATCATGCTTATCCGGCCCATGCTGCTTTTGGAGGATATAAACAATCTGGGATCGGTCGTGAAACCCAT
CATATGATGTTAGCGCACTATCAACAAACGAAAAATTTACTCGTTAGCTACAATCCAAAACCATTAGGATTTTTCTGA

Protein sequence : 
MIYSKPGERDAKVQFKARYDNYINGEWVPPISGQYFKNITPITGEVFCEAARSQAEDIELALDAAHAAKEAWGKTSPADR
ALILNKIADRMEENLEMLAVAETWDNGKPIRETLNADLPLAIDHFRYFAGAIRSQEGTISQIDDDTIAYHFYEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCIVLKPAEQTPASIMVLMELIGDLLPPGVLNVVNGFGLEAGKPLASSSRIAKIAFTG
ETTTGRLIMQYASQNIIPVTLELGGKSPNIFFPDVMEKDDDFLDKAIEGFVMFALNQGEVCTCPSRALIHESIYDEFMER
ALERVKKIRTGNPLDTSTMMGAQASAEQMEKILAYIDIGKQEGAECLIGGEKNIIPGFENGYYIKPTVFKGHNKMRIFQE
EIFGPVVSVTTFKDEQEALEIANDTLYGLGAGVWTRNINLAYRFGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETH
HMMLAHYQQTKNLLVSYNPKPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-149 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-157 65
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 1e-104 64
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 1e-104 64
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 1e-104 64
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 9e-105 64
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 5e-104 64
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 5e-104 64
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 9e-105 64
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 8e-105 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2813 YP_003672334.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 66