Gene Information

Name : GC56T3_2678 (GC56T3_2678)
Accession : YP_003672204.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2830872 - 2832050 bp
Length : 1179 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_1668 cystathionine gamma-synthase

DNA sequence :
ATGGAACAGGAATGGGCGTTTTCGACGAAACTGCTCCATAACGAATGGAAAGTCGACCGCGAAACGGGGGCGGTGAGCGT
GCCGATCCAGCACGCCTCCACGTTCCATCAGTTCGATTTCGATTCATTCGGCAAATACGACTACAGCCGCTCCAGCAACC
CGACGCGCGAGGCGCTTGAGGAAACGATCGCGGCGTTAGAAGGCGGAACGCGCGGGTTTGCGTTCGCCTCTGGTATGGCG
GCTATTTCAACGGCGTTTTTGCTTCTCTCAAAAGGCGACCACGTGCTTGTGACCGAAGACGTCTATGGCGGCACGTACCG
GATGGTTACGGAGGTGCTCGGCCGCTTTGGCATTGAATATACGTTTGTCGATATGACCGATTTAAACGCAGTGGCGGAAA
ACATCCGGCCGAACACGAAAGTCATTTATATGGAAACGCCGTCCAATCCATTGTTAAAAGTGACCGATATTCAAGGCGTC
GTCAAGTTGGCGAAGGCGCATGGCTGTTTGACATTCTTGGATAATACGTTCATGACGCCGGCGCTGCAGCGGCCGCTTGA
TCTTGGAGTCGATGTCGTCCTTCACAGCGCCACGAAATTTTTAGCCGGCCATAGCGACGTCGTCGCAGGATTGGCGGTGG
TGAAAGATGAAGAATTGGGAAAAGAATTGTACAAACTGCAAAACGCGTTTGGCGCCGTCCTTGGCGTCCAAGATGCGTGG
CTTGTGCTGCGGGGATTAAAAACGCTCCACGTTCGGCTGAAGCAGTCGTCTGAATCAGCGGCCGCCATCGCCAAGTATTT
GGCTTGTCATTCAAAGGTCGAAAAAGTGTATTATCCGGGGCTTTCGCACCACCCAGGCCATGACATCCAGCGCCATCAGG
CGGCCGGGTTTGGCGCTGTGCTGTCGTTCCGCTTAGCCGATGAAGAAGCGGCTCGGACGTTCGTCCGAAACGTCCGCCTG
CCGGTGTTTGCTGTCAGCCTTGGGGCGGTCGAGTCGATTTTATCGCACCCGGCGAAAATGTCGCATGCGGCCATGCCAAA
AGAAGAGCGGCTCCGCCGCGGCATTACCGACGGCTTGCTGCGGCTGAGCGTCGGGCTTGAGGATGTGAACGATTTGATCC
GCGATTTCGAGCAGGCGCTGTCGTTCGTGAAAGAGCGGCCGTCGGTTTCAACGACATAG

Protein sequence :
MEQEWAFSTKLLHNEWKVDRETGAVSVPIQHASTFHQFDFDSFGKYDYSRSSNPTREALEETIAALEGGTRGFAFASGMA
AISTAFLLLSKGDHVLVTEDVYGGTYRMVTEVLGRFGIEYTFVDMTDLNAVAENIRPNTKVIYMETPSNPLLKVTDIQGV
VKLAKAHGCLTFLDNTFMTPALQRPLDLGVDVVLHSATKFLAGHSDVVAGLAVVKDEELGKELYKLQNAFGAVLGVQDAW
LVLRGLKTLHVRLKQSSESAAAIAKYLACHSKVEKVYYPGLSHHPGHDIQRHQAAGFGAVLSFRLADEEAARTFVRNVRL
PVFAVSLGAVESILSHPAKMSHAAMPKEERLRRGITDGLLRLSVGLEDVNDLIRDFEQALSFVKERPSVSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-92 55
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-86 50
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-85 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2678 YP_003672204.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 8e-66 42