Gene Information

Name : GC56T3_2648 (GC56T3_2648)
Accession : YP_003672176.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2792726 - 2793406 bp
Length : 681 bp
Strand : +
Note : KEGG: gka:GK0908 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver

DNA sequence : 
ATGACGATGACACGAATTTTAATCGTCGATGATGACGCGCATATCCGCGAACTCGTCAGCCACTTTTTAAACTTAGAAGG
ATTTACAATCCATGAGGCGGCTAACGGAAAAGAAGCACTTGACGTATTGGAAACAGTGAAAGTGGATTTGGTCATTATGG
ATATTATGATGCCGGAAATGGATGGTTGGGAGCTATGTCGCGAACTGCGCGACTACGACGATGTCCCCATTTTAATGTTG
ACGGCCAAAGGGGAAACAAGACAGAAGGTGAAAGGATTCGAGCTCGGGGCGGACGATTATCTTGTCAAACCGTTCGACCC
ACTTGAGCTCGTCGCCCGGGTCAAAGCATTGCTCAAACGGTATCGAATCGCTACATCGCAAATCGTACAAATAGGCCGTT
TATCGTTAAACCGCAAGACGTACGAATGCCGTTTGGGAGACCAAGAGATCTTCTTGCCGCCGAAAGAATTTGAACTGCTT
TTTAAATTGGCCAGCTATCCGGGCAAAACGTTTACACGCGACGAGTTGATTGAACAGATCTGGGGCTACGATTATGATGG
GGATGAACGAACAGTGGATGTGCATATCAAACGATTGCGCGAACGGTTTGCCCAACCAGATTCTCCATTTTCCATCCGCA
CGATTCGCGGGCTCGGCTATCGGTTGGAGGCACAGTCATGA

Protein sequence : 
MTMTRILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWELCRELRDYDDVPILML
TAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIATSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELL
FKLASYPGKTFTRDELIEQIWGYDYDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-37 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-41 46
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-38 44
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-42 44
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 5e-38 44
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 9e-38 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 2e-38 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 5e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 5e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 4e-40 42
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 5e-36 41
GC56T3_2648 YP_003672176.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 5e-36 41