Gene Information

Name : GC56T3_2589 (GC56T3_2589)
Accession : YP_003672121.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0842
EC number : -
Position : 2730692 - 2731717 bp
Length : 1026 bp
Strand : -
Note : PFAM: ABC transporter; KEGG: gyc:GYMC61_1758 ABC-2 type transporter

DNA sequence :
ATGAGAGTGTTGGCCATTGTCGTCCGCATCATCCGCCAGTTTTTCCGCGACAAGCGCACGTTGGCGCTCATGATTGTCGC
GCCGATGTTCGTCTTGTTGTTAATGGATTTGGTGTTTAATGGAGAAGAATACAAACCAGCCATTGCCGTCAGCGAACACG
TGCCTGAGGCGGTTGTGGACAAGTTGAAAGAAGCAGGGGCGAAAGTGAAAGAGCTGTCGGTTAAACAAGCGCGAAAGCAG
CTGGACGATCAAGACATTGACGCATGGCTTGACATGAACGGAAGCGCTCTGCACGTCACGCTGGAAGGAAGCGACCCGAC
TGCCAACCAGGCGGTGATGGCCGCGGTGCAAAAGGCGTTTCAGTCCATGGCGCCAAAACCCCCGTTTCAGCTGAAAACCA
CGTATTGGCACGGGTCAAGCGACATGGCGTCATTCGATTATTTCGGCCCCGTGTTGATCGGCTTTTTCGTCTTCTTTTTC
GTCTTTTTGATTGCCGGAGTGTCATTTTTGCGCGAGCGGACGAACGGGACGATCGAACGGCTGATGGCGACGCCGCTCAG
GCGCTGGGAAATGGTCGCCGGCTACATGATCGGGTTCGGGTTGTTTACGACGATTCAGGCAAGCTTAATTTCATGGTTTG
CCATTGATGTCCTGGACATGATGATGGAAGGTTCGTTTTGGTATGTGCTGCTCATTACGTTTTTGCTGGCGATGACGGCG
CTTGCGCTTGGGATGCTGCTGTCGGCGTTCGCCAACAACGAGCTGCAAATGGTGCAGTTTATCCCGCTTGTCGTCGTGCC
GCAAGTGTTTTTCTCCGGCTTGTTCAATCTTGACACGATGGAAGAATGGCTTCGCTCGCTGAGCGTCATCATGCCGCTCA
CATACGGGGCGGACGCGCTGCGCGATATTATGGTGCGCGGAGAGGGCTTGGGCGCCATCGCCGTGGATGTGTACGTGTTG
CTTGGCTTTACGTTGCTGTTTATGCTATTAAATGTAGTAGCGCTGAAAAAATACCGCAAGCTGTAA

Protein sequence :
MRVLAIVVRIIRQFFRDKRTLALMIVAPMFVLLLMDLVFNGEEYKPAIAVSEHVPEAVVDKLKEAGAKVKELSVKQARKQ
LDDQDIDAWLDMNGSALHVTLEGSDPTANQAVMAAVQKAFQSMAPKPPFQLKTTYWHGSSDMASFDYFGPVLIGFFVFFF
VFLIAGVSFLRERTNGTIERLMATPLRRWEMVAGYMIGFGLFTTIQASLISWFAIDVLDMMMEGSFWYVLLITFLLAMTA
LALGMLLSAFANNELQMVQFIPLVVVPQVFFSGLFNLDTMEEWLRSLSVIMPLTYGADALRDIMVRGEGLGAIAVDVYVL
LGFTLLFMLLNVVALKKYRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 3e-51 46
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 5e-51 45