Gene Information

Name : GC56T3_2584 (GC56T3_2584)
Accession : YP_003672116.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2725645 - 2727783 bp
Length : 2139 bp
Strand : +
Note : KEGG: gyc:GYMC61_1763 ATPase AAA; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGCGCTGCCAAGCATGCCAACAACGTGAAGCAACGGTGTTTGTCAACTTGCAATGGAACGGTGAAAAACAACAACTTCA
CCTGTGCCATGAATGCTATGAAAAACAAAAACAACAATTGTCGATTCCGATGATGAACTTCGGCTTTTCGCCGTTTTCCT
TTGATGACTTCTTTACTAGCCCGTTCACAGCCGCCAACGCGGGGATGAGCTCGCCAGAAACGATGGCGAAACGCCCGCAA
AGCCATAGCGGCGGATTTTTGGATCAGTTTGGCCGCAACTTGACGCAAATGGCCAAAGCGGGCTTGATCGATCCGGTCAT
CGGCCGCGACAAAGAAATCGCACGCGTCATGGAAATTTTAAACCGCCGCAACAAAAACAACCCGGTGTTGATTGGGGAGC
CAGGCGTCGGGAAAACGGCCATCGTTGAAGGGCTTGCGCTGAAAATTGCCGAAGGGCAAGTGCCAGAAAAACTGTTGAAC
AAAGAAGTGTACTTGCTTGACGTCGCTTCGCTTGTTGCCAACACCGGCATCCGCGGCCAATTTGAAGAGCGGATGAAACG
GCTCATCGCCGAACTGCAAGAGCGGAAAAACATCATCTTGTTCATTGACGAAATCCATCTGCTCGTCGGTGCTGGAGCCG
CTGAAGGCTCGATGGACGCGGGCAACATTTTAAAACCGGCGCTTGCCCGCGGCGAGCTGCAAGTCGTTGGGGCGACGACA
CTCAAAGAATACCGGCAAATTGAAAAAGACGCGGCTCTTGAGCGCCGCTTCCAACCGGTCATCGTCCACGAGCCGACCGT
TGAGGAAGCGATCGCCATCTTAAAAGGCATTCAGCCAAAATATGAACAATTCCATCATGTCCGCTATACGGACGAAGCGA
TCGAAGCGTGCGTGAAATTGTCGCACCGCTACATTCAAGACCGCTTCCTCCCGGACAAGGCGATCGACTTGCTTGACGAG
GCCGGCTCGAAAGCGAACTTGCGCCTCGGCCCGACCGATGAAAAACAACTGCAAGAGCGGTTGATCCAAATCGCGAAAGA
AAAAGAACAAGCGGCGAAAGAGGAAAACTATGAACTGGCGGCGAAACTGCGCGCTGAAGAGCTGAAGCTTGAGAAACAAC
TCGAGCAAGGCGTCACCCAAGAACGCCCAACAGTCGATGCCGCCGACATCGAGCAAATCATTGCCGAGAAAACCGGCATC
CCGGTCGGCAAACTGCAAGCCGATGAAAAAGAAAAAATGAAACATCTCGAAGAAAACTTGGCGAAAAAAGTGATCGGCCA
AGCGGAAGCGGTGAAAAAAGTCGCGAAAGCCATTCGCCGCAGCCGCGCCGGCTTGAAAGCGAAACACCGCCCGATCGGTT
CGTTCTTGTTCGTCGGCCCGACCGGCGTCGGGAAAACGGAGCTCGCCAAAACGCTCGCCGAGGAGCTGTTTGGCACAAAA
GACGCCATGATTCGCCTCGATATGAGCGAATACATGGAGAAACATTCCGTCTCGAAGCTGATCGGTTCGCCGCCGGGCTA
TGTCGGCTTTGAAGAAGCCGGCCAGCTGACGGAAAAAGTGCGCCGCAACCCATACAGCATCATCTTGCTTGACGAGATTG
AAAAAGCGCACCCGGATGTGCAGCACATCTTCCTGCAAATTTTGGAAGACGGCCGCTTAACCGACAGCCAAGGCCGCACC
GTCAGCTTCAAAGACACGGTCATCATTGCGACAAGCAACGCCGGCGCAACCGATAAAAAAATCACCGTCGGCTTTGAAAA
AGAGGGAAACGGGCAAACAAGCGTCCTTGACTCGCTCAGCGCCTACTTCAAGCCGGAATTTTTGAACCGCTTCGACGCCA
TCATCGAGTTCAAGCCGCTCGAAAAAGCGCACTTGCTTGAGATCGTCGACCTGATGCTCGCTGACGTCAAAGCAGCGATG
CGCGAACAAGGCATTGAACTCGAAGTGACCGAAACGGCGAAAGAAAAACTGGCCGAACTCGGCTACCATCCGGCCTTCGG
CGCCCGCCCGCTCCGCCGCGTCATCCAAGAGCATGTCGAAGACAATATCGCTGACTGCCTGCTTGACGCGGATCAATCGG
TGCGCGCAATCCGCATCGACGTTGAAGGGGACGCCATTGTGGCGAAAATCGAATCATAA

Protein sequence :
MRCQACQQREATVFVNLQWNGEKQQLHLCHECYEKQKQQLSIPMMNFGFSPFSFDDFFTSPFTAANAGMSSPETMAKRPQ
SHSGGFLDQFGRNLTQMAKAGLIDPVIGRDKEIARVMEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPEKLLN
KEVYLLDVASLVANTGIRGQFEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATT
LKEYRQIEKDAALERRFQPVIVHEPTVEEAIAILKGIQPKYEQFHHVRYTDEAIEACVKLSHRYIQDRFLPDKAIDLLDE
AGSKANLRLGPTDEKQLQERLIQIAKEKEQAAKEENYELAAKLRAEELKLEKQLEQGVTQERPTVDAADIEQIIAEKTGI
PVGKLQADEKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAKTLAEELFGTK
DAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRT
VSFKDTVIIATSNAGATDKKITVGFEKEGNGQTSVLDSLSAYFKPEFLNRFDAIIEFKPLEKAHLLEIVDLMLADVKAAM
REQGIELEVTETAKEKLAELGYHPAFGARPLRRVIQEHVEDNIADCLLDADQSVRAIRIDVEGDAIVAKIES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-156 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2584 YP_003672116.1 ATPase AAA VFG0080 Protein 0.0 64
GC56T3_2584 YP_003672116.1 ATPase AAA VFG0079 Protein 7e-155 54